C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine-rich repeats and transmembrane domains 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168793 Lrtm2-201 ENSMUSG00000055003 10090 - 6:119315133-119329204 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168793
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168793 0.286±0.16 0.060±0.05 0.023±0.00 0.123±0.05 0.085±0.03 0.150±0.08 0.959±0.22 0.034±0.03 0.731±0.00 0.457±0.19 0.253±0.18 0.018±0.01 0.043±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XJ CIL_0003XJ_0003 CGP 6:119236526-119352407

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299194 LRTM2-001 protein_coding Homo_sapiens 0 1219
ENST00000535041 LRTM2-002 protein_coding Homo_sapiens 0 1219
ENST00000543730 LRTM2-009 processed_transcript Homo_sapiens 0 529
ENST00000543818 LRTM2-201 protein_coding Homo_sapiens 0 1219

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