C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055065 Ddx17 10090 - 15:79527707-79546741 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054014 Ddx17-201 79527707-79546741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000054014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000054014 86.770±4.62 148.472±24.46 61.288±28.14 79.280±47.90 53.141±18.17 54.686±22.28 19.481±5.42 37.147±11.71 35.557±20.89 84.590±36.09 7.693±0.82 121.163±78.95 39.858±23.45 25.984±6.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0005DI CIL_0005DI_0002 CGP 15:79483718-79527739
CIL_0005DJ CIL_0005DJ_0002 CGP 15:79516408-79546741
CIL_0005DK CIL_0005DK_0002 CGP 15:79527707-79605084

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003713 ISS transcription coactivator activity
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0006200 IEA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0008026 IEA ATP-dependent helicase activity
GO:0009791 IMP post-embryonic development
GO:0030331 ISS estrogen receptor binding
GO:0033148 ISS positive regulation of intracellular estrogen receptor signaling pathway
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0072358 IMP cardiovascular system development
GO:2001014 ISS regulation of skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010873 DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 protein_coding Danio_rerio
ENSG00000100201 DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 protein_coding Homo_sapiens

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