C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100201-ENSG00000100206 CGP 9606 22:38483440-38570286
GeneTranscriptPositionBiotype
ENSG00000100196 (KDELR3)
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 		ENST00000216014 (KDELR3-001) 38468062-38483447 protein_coding
ENST00000409006 (KDELR3-002) 38468078-38481635 protein_coding
ENST00000471268 (KDELR3-003) 38474329-38482922 processed_transcript
ENSG00000100201 (DDX17)
DEAD (Asp-Glu-Ala-Asp) box helicase 17 		ENST00000216019 (DDX17-003) 38485681-38506294 retained_intron
ENST00000396821 (DDX17-001) 38483440-38506337 protein_coding
ENST00000403230 (DDX17-002) 38485878-38506312 protein_coding
ENST00000431312 (DDX17-011) 38485677-38488961 retained_intron
ENST00000432525 (DDX17-005) 38490313-38507660 processed_transcript
ENST00000467279 (DDX17-006) 38498553-38505901 processed_transcript
ENST00000475004 (DDX17-010) 38489177-38493771 processed_transcript
ENST00000477112 (DDX17-008) 38494310-38495046 retained_intron
ENST00000479734 (DDX17-004) 38505165-38506306 processed_transcript
ENST00000497196 (DDX17-007) 38493361-38495046 retained_intron
ENSG00000100206 (DMC1)
DNA meiotic recombinase 1 		ENST00000216024 (DMC1-001) 38518949-38570286 protein_coding
ENST00000415483 (DMC1-003) 38552671-38568409 protein_coding
ENST00000428462 (DMC1-201) 38518949-38568409 protein_coding
ENST00000439567 (DMC1-005) 38538295-38570131 protein_coding
ENST00000464842 (DMC1-004) 38569284-38570204 processed_transcript
ENST00000478820 (DMC1-002) 38549498-38570184 retained_intron
ENST00000616615 (DMC1-202) 38545768-38570184 protein_coding
CIL_0005DK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055065-ENSMUSG00000022429 CGP 10090 15:79527707-79605084
GeneTranscriptPositionBiotype
ENSMUSG00000010830 (Kdelr3)
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 		ENSMUST00000010974 (Kdelr3-201) 79516408-79527739 protein_coding
ENSMUSG00000022429 (Dmc1)
DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination 		ENSMUST00000023065 (Dmc1-201) 79561500-79605084 protein_coding
ENSMUSG00000055065 (Ddx17)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 		ENSMUST00000054014 (Ddx17-201) 79527707-79546741 protein_coding
ENSMUSG00000093223 (Gm27903)
predicted gene, 27903 		ENSMUST00000175482 (Gm27903-201) 79594668-79594793 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DK_0001ENSG00000100196ENST00000216014ENST00000409006ENST00000471268ENSG00000100201ENST00000216019ENST00000396821ENST00000403230ENST00000431312ENST00000432525ENST00000467279ENST00000475004ENST00000477112ENST00000479734ENST00000497196ENSG00000100206ENST00000216024ENST00000415483ENST00000428462ENST00000439567ENST00000464842ENST00000478820ENST00000616615CIL_0005DK_0002ENSMUSG00000010830ENSMUST00000010974ENSMUSG00000022429ENSMUST00000023065ENSMUSG00000055065ENSMUST00000054014ENSMUSG00000093223ENSMUST00000175482
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DK_0001ENSG00000100196ENST00000216014ENSG00000100201ENST00000216019ENST00000396821ENST00000403230ENST00000432525ENSG00000100206ENST00000216024ENST00000415483ENST00000428462ENST00000439567ENST00000464842ENST00000616615CIL_0005DK_0002ENSMUSG00000010830ENSMUST00000010974ENSMUSG00000022429ENSMUST00000023065ENSMUSG00000055065ENSMUST00000054014ENSMUSG00000093223ENSMUST00000175482
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100196 ENST00000216014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.725±0.00 N/A
ENST00000409006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100201 ENST00000216019 N/A N/A 12.776±0.00 N/A 8.109±0.00 10.945±0.00 N/A N/A 12.893±0.00 N/A 3.508±0.00 16.724±0.00 N/A N/A
ENST00000396821 9.675±0.00 14.022±0.00 27.513±0.00 18.714±3.09 40.112±0.82 34.679±8.54 12.908±4.69 14.573±6.70 21.433±10.15 22.035±5.78 14.602±6.19 72.707±23.44 20.478±7.61 15.906±1.51
ENST00000403230 N/A N/A N/A N/A 18.842±0.00 N/A 16.848±0.00 16.661±0.00 48.759±0.00 N/A 17.976±0.00 39.176±0.00 N/A N/A
ENST00000431312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432525 N/A N/A N/A N/A 33.927±0.00 44.747±0.00 N/A N/A N/A 57.815±0.00 N/A N/A N/A N/A
ENST00000467279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100206 ENST00000216024 N/A N/A N/A 0.222±0.00 N/A 0.282±0.00 0.066±0.00 N/A N/A 0.059±0.00 N/A 0.169±0.00 0.228±0.01 3.350±2.47
ENST00000415483 N/A N/A N/A N/A 0.177±0.00 0.358±0.00 N/A N/A N/A 0.516±0.00 N/A N/A 0.630±0.00 8.015±0.00
ENST00000428462 0.211±0.00 0.102±0.00 0.021±0.00 N/A 0.060±0.04 N/A N/A 0.033±0.00 0.034±0.03 N/A 0.142±0.00 0.108±0.02 0.063±0.00 N/A
ENST00000439567 N/A N/A N/A 0.332±0.00 0.128±0.00 N/A N/A N/A 0.128±0.00 0.256±0.00 N/A 0.081±0.03 N/A 4.738±0.00
ENST00000464842 N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 N/A 1.114±0.00 N/A 0.766±0.00 0.461±0.00 N/A
ENST00000478820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616615 0.254±0.00 0.510±0.00 N/A 0.253±0.00 0.265±0.00 N/A 0.141±0.00 0.193±0.00 0.018±0.00 0.138±0.00 0.070±0.00 0.067±0.05 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010830 ENSMUST00000010974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.351±0.00 N/A
ENSMUSG00000022429 ENSMUST00000023065 0.106±0.05 0.252±0.27 0.219±0.07 0.324±0.18 0.112±0.05 0.078±0.03 0.064±0.03 0.066±0.00 0.161±0.19 0.125±0.05 0.018±0.01 0.234±0.13 0.098±0.06 3.309±0.46
ENSMUSG00000055065 ENSMUST00000054014 86.770±4.62 148.472±24.46 61.288±28.14 79.280±47.90 53.141±18.17 54.686±22.28 19.481±5.42 37.147±11.71 35.557±20.89 84.590±36.09 7.693±0.82 121.163±78.95 39.858±23.45 25.984±6.67
ENSMUSG00000093223 ENSMUST00000175482 N/A N/A 19.455±0.00 11.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.130±0.00

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