C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEL-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081872 Nell1-001 ENSMUSG00000055409 10090 + 7:49974864-50865255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverLungOvaryPlacentaTestisENSMUST00000081872
Transcript ID Adipose Adrenal Brain Colon Liver Lung Ovary Placenta Testis
ENSMUST00000081872 0.456±0.16 0.090±0.01 0.353±0.08 0.109±0.06 0.006±0.00 0.019±0.00 0.268±0.12 0.057±0.00 0.030±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043M CIL_00043M_0002 CGP 7:49910146-50865255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0005635 ISS nuclear envelope
GO:0005737 ISS cytoplasm
GO:0010468 ISS regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0030501 ISS positive regulation of bone mineralization
GO:0033689 ISS negative regulation of osteoblast proliferation
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0048471 ISS perinuclear region of cytoplasm
GO:2000599 ISS negative regulation of cyclin catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298925 NELL1-002 protein_coding Homo_sapiens 0 3027
ENST00000325319 NELL1-201 protein_coding Homo_sapiens 0 2582
ENST00000357134 NELL1-001 protein_coding Homo_sapiens 0 3166
ENST00000527873 NELL1-011 processed_transcript Homo_sapiens 0 562
ENST00000528046 NELL1-009 processed_transcript Homo_sapiens 0 198
ENST00000529218 NELL1-005 processed_transcript Homo_sapiens 0 641
ENST00000529595 NELL1-010 processed_transcript Homo_sapiens 0 481
ENST00000530672 NELL1-008 processed_transcript Homo_sapiens 0 599
ENST00000532434 NELL1-003 protein_coding Homo_sapiens 0 1940
ENST00000619031 NELL1-202 protein_coding Homo_sapiens 0 2830

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