C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peroxisome proliferative activated receptor, gamma, coactivator-related 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055491 Pprc1 10090 + 19:46044886-46072915 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062322 Pprc1-002 46056584-46072909 protein_coding
  ENSMUST00000099392 Pprc1-003 46056581-46072915 protein_coding
  ENSMUST00000111899 Pprc1-001 46056539-46072911 protein_coding
  ENSMUST00000126127 Pprc1-009 46057236-46062628 protein_coding
  ENSMUST00000128386 Pprc1-008 46056832-46061458 processed_transcript
  ENSMUST00000133101 Pprc1-011 46067834-46069088 processed_transcript
  ENSMUST00000134015 Pprc1-005 46044886-46062197 processed_transcript
  ENSMUST00000135327 Pprc1-006 46056832-46062438 protein_coding
  ENSMUST00000146882 Pprc1-012 46071754-46072801 retained_intron
  ENSMUST00000147640 Pprc1-010 46057259-46062644 protein_coding
  ENSMUST00000150158 Pprc1-007 46056864-46062803 protein_coding
  ENSMUST00000153111 Pprc1-004 46064081-46072801 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062322ENSMUST00000099392ENSMUST00000111899
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062322 7.712±0.00 N/A 9.564±0.77 4.910±0.00 N/A N/A 1.677±0.37 N/A 1.087±0.08 10.840±1.21 6.760±4.74 1.932±0.36
ENSMUST00000099392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.171±0.00 N/A
ENSMUST00000111899 10.623±2.46 6.441±0.63 7.344±0.00 6.139±0.96 3.270±0.14 3.198±0.41 4.938±3.24 7.665±0.97 2.307±0.31 12.153±2.45 6.394±1.78 2.171±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099E CIL_00099E_0002 VISTA 19:45446900-46047683
CIL_0005WD CIL_0005WD_0002 CGP 19:46003478-46045214
CIL_00058F CIL_00058F_0002 CGP 19:46032593-46072915
CIL_0005WF CIL_0005WF_0002 CGP 19:46044886-46085528

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090337 pprc1 peroxisome proliferator-activated receptor gamma, coactivator-related 1 protein_coding Danio_rerio
ENSG00000148840 PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1 protein_coding Homo_sapiens

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