C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: peroxisome proliferative activated receptor, gamma, coactivator-related 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099392 Pprc1-003 ENSMUSG00000055491 10090 + 19:46056581-46072915 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000099392
Transcript ID Placenta
ENSMUST00000099392 10.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099E CIL_00099E_0002 VISTA 19:45446900-46047683
CIL_0005WD CIL_0005WD_0002 CGP 19:46003478-46045214
CIL_00058F CIL_00058F_0002 CGP 19:46032593-46072915
CIL_0005WF CIL_0005WF_0002 CGP 19:46044886-46085528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278070 PPRC1-001 protein_coding Homo_sapiens 0 1328
ENST00000370012 PPRC1-002 protein_coding Homo_sapiens 0 475
ENST00000413464 PPRC1-201 protein_coding Homo_sapiens 0 1328
ENST00000462933 PPRC1-003 processed_transcript Homo_sapiens 6e-34 148
ENST00000489648 PPRC1-005 processed_transcript Homo_sapiens 0 374

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