C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peroxisome proliferative activated receptor, gamma, coactivator-related 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111899 Pprc1-001 ENSMUSG00000055491 10090 + 19:46056539-46072911 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111899
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111899 10.623±2.46 6.441±0.63 7.344±0.00 6.139±0.96 3.270±0.14 3.198±0.41 4.938±3.24 7.665±0.97 2.307±0.31 12.153±2.45 6.394±1.78 2.171±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099E CIL_00099E_0002 VISTA 19:45446900-46047683
CIL_0005WD CIL_0005WD_0002 CGP 19:46003478-46045214
CIL_00058F CIL_00058F_0002 CGP 19:46032593-46072915
CIL_0005WF CIL_0005WF_0002 CGP 19:46044886-46085528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278070 PPRC1-001 protein_coding Homo_sapiens 0 2543
ENST00000370012 PPRC1-002 protein_coding Homo_sapiens 0 2206
ENST00000413464 PPRC1-201 protein_coding Homo_sapiens 0 1437
ENST00000462933 PPRC1-003 processed_transcript Homo_sapiens 6e-34 148
ENST00000489648 PPRC1-005 processed_transcript Homo_sapiens 0 374
ENST00000495914 PPRC1-004 processed_transcript Homo_sapiens 0 468

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