C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: formin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055805 Fmnl1 10090 + 11:103171107-103198901 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021322 Fmnl1-006 103192312-103198895 retained_intron
  ENSMUST00000042286 Fmnl1-001 103171107-103198901 protein_coding
  ENSMUST00000107027 Fmnl1-002 103171313-103198895 protein_coding
  ENSMUST00000126425 Fmnl1-003 103180747-103190368 processed_transcript
  ENSMUST00000129726 Fmnl1-005 103196801-103197876 protein_coding
  ENSMUST00000154871 Fmnl1-004 103185228-103190658 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021322ENSMUST00000042286ENSMUST00000107027ENSMUST00000129726ENSMUST00000154871
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021322 N/A N/A N/A 10.223±9.14 4.654±0.00 N/A N/A N/A N/A N/A 1.136±0.00 N/A N/A 1.557±0.51
ENSMUST00000042286 4.924±1.59 4.192±0.62 2.687±0.23 2.193±0.59 17.484±6.56 1.579±0.67 3.031±1.43 9.155±1.35 1.755±1.49 8.877±1.67 1.091±0.87 1.246±0.63 1.457±0.87 2.184±0.80
ENSMUST00000107027 N/A N/A N/A 8.670±7.35 N/A N/A 0.553±0.00 N/A N/A N/A N/A N/A 0.636±0.00 N/A
ENSMUST00000129726 N/A N/A N/A 48.970±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.926±0.00
ENSMUST00000154871 N/A N/A N/A N/A 7.330±0.00 N/A N/A N/A 0.632±0.35 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QX CIL_0002QX_0002 CGP 11:103132429-103198901

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005522 IDA profilin binding
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0006929 IMP substrate-dependent cell migration
GO:0007010 IEA cytoskeleton organization
GO:0008360 ISS regulation of cell shape
GO:0009987 IMP cellular process
GO:0016020 IEA membrane
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization
GO:0030866 ISS cortical actin cytoskeleton organization
GO:0032794 IDA GTPase activating protein binding
GO:0045335 IDA phagocytic vesicle
GO:0048365 IDA Rac GTPase binding
GO:0051014 IDA actin filament severing
GO:0051015 IDA actin filament binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055713 fmnl1a formin-like 1a protein_coding Danio_rerio
ENSDARG00000075519 FMNL1 (2 of 2) formin-like 1 protein_coding Danio_rerio
ENSG00000184922 FMNL1 formin-like 1 protein_coding Homo_sapiens

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