C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107027 Fmnl1-002 ENSMUSG00000055805 10090 + 11:103171313-103198895 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartPlacentaENSMUST00000107027
Transcript ID Brain Heart Placenta
ENSMUST00000107027 8.670±7.35 0.553±0.00 0.636±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QX CIL_0002QX_0002 CGP 11:103132429-103198901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005522 IDA profilin binding
GO:0005829 IDA cytosol
GO:0006929 IMP substrate-dependent cell migration
GO:0008360 IEA regulation of cell shape
GO:0009987 IMP cellular process
GO:0017048 IEA Rho GTPase binding
GO:0030036 IEA actin cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109023 fmnl3-202 protein_coding Danio_rerio 0 377
ENSDART00000147440 fmnl3-002 protein_coding Danio_rerio 0 377
ENSDART00000083495 fmnl1a-201 protein_coding Danio_rerio 8e-19 100
ENSDART00000151144 fmnl1a-001 protein_coding Danio_rerio 8e-19 100
ENST00000328118 FMNL1-201 protein_coding Homo_sapiens 0 1441
ENST00000331495 FMNL1-001 protein_coding Homo_sapiens 0 3685
ENST00000550488 FMNL3-003 protein_coding Homo_sapiens 0.0000000002 73
ENST00000585852 FMNL1-003 retained_intron Homo_sapiens 0 337
ENST00000586643 FMNL1-007 protein_coding Homo_sapiens 0 1279
ENST00000587489 FMNL1-006 protein_coding Homo_sapiens 0 1784
ENST00000587856 FMNL1-005 retained_intron Homo_sapiens 0 909
ENST00000592006 FMNL1-013 processed_transcript Homo_sapiens 0 1026
ENST00000592527 FMNL1-004 retained_intron Homo_sapiens 0 233

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