C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger with KRAB and SCAN domains 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055991 Zkscan5 10090 + 5:145204562-145221750 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031601 Zkscan5-002 145204668-145221750 protein_coding
  ENSMUST00000085671 Zkscan5-001 145204562-145221750 protein_coding
  ENSMUST00000160162 Zkscan5-006 145208568-145218296 processed_transcript
  ENSMUST00000161881 Zkscan5-005 145207634-145218480 protein_coding
  ENSMUST00000161896 Zkscan5-003 145205123-145218562 nonsense_mediated_decay
  ENSMUST00000162168 Zkscan5-004 145207604-145218426 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031601ENSMUST00000085671ENSMUST00000161896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031601 1.550±0.14 0.765±0.15 1.001±0.00 1.076±0.13 1.268±0.28 1.462±0.50 0.510±0.26 1.155±0.73 0.580±0.15 0.477±0.00 0.438±0.00 1.809±0.78 1.324±0.55 2.257±0.00
ENSMUST00000085671 1.640±0.27 0.889±0.53 2.214±0.26 2.321±0.58 1.144±0.00 1.277±0.57 0.890±0.43 1.225±0.48 1.032±0.24 0.490±0.18 2.371±0.49 1.942±0.95 1.915±0.92 3.555±0.99
ENSMUST00000161896 N/A 1.167±0.00 N/A N/A 0.660±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TF CIL_0004TF_0002 CGP 5:145194946-145221750

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196652 ZKSCAN5 zinc finger with KRAB and SCAN domains 5 protein_coding Homo_sapiens

Loading