C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger with KRAB and SCAN domains 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196652 ZKSCAN5 9606 + 7:99504651-99534700 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326775 ZKSCAN5-005 99504651-99533784 protein_coding
  ENST00000394170 ZKSCAN5-001 99504950-99533822 protein_coding
  ENST00000451158 ZKSCAN5-004 99504675-99532679 protein_coding
  ENST00000454175 ZKSCAN5-002 99505254-99534700 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326775ENST00000394170ENST00000451158ENST00000454175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326775 1.292±0.00 1.110±0.00 N/A 1.006±0.00 N/A 1.127±0.00 0.739±0.00 0.961±0.86 0.265±0.04 1.100±0.00 0.816±0.58 2.137±0.93 1.002±0.20 4.070±1.43
ENST00000394170 N/A 0.567±0.00 N/A 0.752±0.41 1.234±0.00 N/A N/A 0.376±0.00 0.484±0.00 N/A N/A N/A 1.017±0.93 N/A
ENST00000451158 N/A N/A N/A 0.550±0.00 0.167±0.00 N/A 0.240±0.16 0.121±0.00 N/A N/A 0.188±0.00 N/A N/A 3.898±0.00
ENST00000454175 0.506±0.00 0.603±0.00 0.110±0.00 0.912±0.04 0.856±0.00 N/A 0.406±0.10 0.556±0.44 0.373±0.00 0.307±0.11 0.325±0.09 0.903±0.24 0.442±0.06 1.450±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TF CIL_0004TF_0001 CGP 7:99486519-99534700

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 NAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 NAS:IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS:IEA regulation of transcription, DNA-templated
GO:0008270 NAS zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000055991 Zkscan5 zinc finger with KRAB and SCAN domains 5 protein_coding Mus_musculus

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