C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 47, member E
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057068 Fam47e 10090 + 5:92555069-92591279 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000082382 Fam47e-005 92571556-92590731 protein_coding
  ENSMUST00000131166 Fam47e-001 92571537-92591279 protein_coding
  ENSMUST00000146417 Fam47e-002 92555069-92590760 protein_coding
  ENSMUST00000149617 Fam47e-003 92555102-92590660 nonsense_mediated_decay
  ENSMUST00000175974 Fam47e-004 92571536-92591278 protein_coding
  ENSMUST00000176448 Fam47e-006 92571543-92585384 protein_coding
  ENSMUST00000176621 Fam47e-007 92571477-92590882 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000082382ENSMUST00000131166ENSMUST00000146417ENSMUST00000175974ENSMUST00000176448ENSMUST00000176621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000082382 N/A 0.116±0.00 N/A N/A N/A 0.114±0.00 N/A 0.112±0.00 0.252±0.00 N/A N/A N/A N/A
ENSMUST00000131166 N/A N/A N/A N/A N/A N/A N/A N/A 1.747±1.12 N/A 1.228±0.45 0.169±0.10 N/A
ENSMUST00000146417 N/A N/A 0.074±0.00 0.037±0.00 0.037±0.00 0.038±0.00 0.135±0.15 0.026±0.00 N/A 1.749±0.81 2.521±1.51 N/A 0.047±0.02
ENSMUST00000175974 N/A N/A 0.072±0.00 N/A N/A N/A N/A 0.094±0.03 1.478±0.33 1.826±0.00 3.240±1.72 N/A 0.047±0.00
ENSMUST00000176448 0.081±0.00 N/A N/A N/A N/A N/A N/A 0.223±0.09 2.718±1.08 N/A N/A 0.221±0.15 N/A
ENSMUST00000176621 N/A N/A N/A N/A N/A N/A N/A 0.247±0.05 0.237±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VL CIL_0008VL_0002 VISTA 5:92327753-92928377
CIL_00071J CIL_00071J_0002 CGP 5:92443873-92591279
CIL_00071I CIL_00071I_0002 CGP 5:92555069-92606579

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067694 zgc:158260 zgc:158260 protein_coding Danio_rerio
ENSDARG00000089020 zgc:158260 zgc:158260 protein_coding Danio_rerio
ENSG00000189157 FAM47E family with sequence similarity 47, member E protein_coding Homo_sapiens
ENSG00000272414 FAM47E-STBD1 FAM47E-STBD1 readthrough protein_coding Homo_sapiens

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