C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000272414-ENSG00000118804 CGP 9606 4:76251721-76311599
GeneTranscriptPositionBiotype
ENSG00000118804 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000237642 (FAM47E-STBD1-001) 76306026-76311599 protein_coding
ENSG00000189157 (FAM47E)
family with sequence similarity 47, member E 		ENST00000424749 (FAM47E-001) 76251741-76283754 protein_coding
ENST00000502320 (FAM47E-002) 76251733-76283779 retained_intron
ENST00000510197 (FAM47E-007) 76214040-76283780 protein_coding
ENST00000510328 (FAM47E-006) 76251700-76278655 retained_intron
ENST00000511946 (FAM47E-011) 76278119-76283774 processed_transcript
ENST00000512895 (FAM47E-009) 76214104-76268769 protein_coding
ENST00000515589 (FAM47E-003) 76236269-76256460 processed_transcript
ENST00000606246 (FAM47E-013) 76256453-76268911 protein_coding
ENST00000606550 (FAM47E-012) 76267506-76269614 retained_intron
ENSG00000272414 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000509377 (FAM47E-STBD1-003) 76251733-76310044 nonsense_mediated_decay
ENST00000514140 (FAM47E-STBD1-001) 76263812-76311129 protein_coding
ENST00000514365 (FAM47E-STBD1-002) 76251732-76310379 nonsense_mediated_decay
ENST00000515604 (FAM47E-STBD1-004) 76251721-76311120 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_00071I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000057068-ENSMUSG00000047963 CGP 10090 5:92555069-92606579
GeneTranscriptPositionBiotype
ENSMUSG00000047963 (Stbd1)
starch binding domain 1 		ENSMUST00000050952 (Stbd1-201) 92603051-92606579 protein_coding
ENSMUSG00000057068 (Fam47e)
family with sequence similarity 47, member E 		ENSMUST00000082382 (Fam47e-005) 92571556-92590731 protein_coding
ENSMUST00000131166 (Fam47e-001) 92571537-92591279 protein_coding
ENSMUST00000146417 (Fam47e-002) 92555069-92590760 protein_coding
ENSMUST00000149617 (Fam47e-003) 92555102-92590660 nonsense_mediated_decay
ENSMUST00000175974 (Fam47e-004) 92571536-92591278 protein_coding
ENSMUST00000176448 (Fam47e-006) 92571543-92585384 protein_coding
ENSMUST00000176621 (Fam47e-007) 92571477-92590882 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071I_0001ENSG00000118804ENST00000237642ENSG00000189157ENST00000424749ENST00000502320ENST00000510197ENST00000510328ENST00000511946ENST00000512895ENST00000515589ENST00000606246ENST00000606550ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604CIL_00071I_0002ENSMUSG00000047963ENSMUST00000050952ENSMUSG00000057068ENSMUST00000082382ENSMUST00000131166ENSMUST00000146417ENSMUST00000149617ENSMUST00000175974ENSMUST00000176448ENSMUST00000176621
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071I_0001ENSG00000118804ENST00000237642ENSG00000189157ENST00000424749ENST00000502320ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604CIL_00071I_0002ENSMUSG00000047963ENSMUST00000050952ENSMUSG00000057068ENSMUST00000082382ENSMUST00000131166ENSMUST00000146417ENSMUST00000175974ENSMUST00000176448ENSMUST00000176621
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000118804 ENST00000237642 N/A 1.846±0.00 0.396±0.00 0.713±0.00 5.360±3.12 1.839±0.01 2.464±1.51 7.938±0.00 1.787±0.00 1.900±1.02 5.758±0.21 1.761±0.44 4.118±0.77 2.481±0.38
ENSG00000189157 ENST00000424749 N/A N/A 0.980±0.00 1.019±0.00 N/A N/A N/A 2.599±0.00 N/A N/A N/A N/A N/A N/A
ENST00000502320 N/A N/A N/A 1.392±0.00 N/A N/A 0.139±0.00 0.476±0.00 N/A N/A N/A N/A N/A 0.903±0.00
ENST00000510197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272414 ENST00000509377 N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A N/A
ENST00000514140 N/A 2.345±0.00 N/A N/A N/A 2.225±0.00 0.997±0.00 1.507±0.00 N/A N/A N/A 3.788±1.14 3.051±1.55 3.103±0.00
ENST00000514365 N/A 1.706±0.00 N/A N/A N/A N/A N/A N/A 2.333±0.00 N/A N/A 4.475±0.00 6.419±0.00 3.305±0.00
ENST00000515604 N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A N/A 4.751±0.00 N/A 0.755±0.00 N/A 2.772±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000047963 ENSMUST00000050952 3.593±1.44 2.738±0.23 6.668±0.08 1.236±0.30 2.631±1.42 1.748±0.30 2.519±0.31 2.981±0.25 11.297±9.88 7.617±2.52 14.033±2.74 11.601±3.45 2.483±0.99 0.925±0.29
ENSMUSG00000057068 ENSMUST00000082382 N/A 0.116±0.00 N/A N/A N/A 0.114±0.00 N/A 0.112±0.00 0.252±0.00 N/A N/A N/A N/A N/A
ENSMUST00000131166 N/A N/A N/A N/A N/A N/A N/A N/A 1.747±1.12 N/A N/A 1.228±0.45 0.169±0.10 N/A
ENSMUST00000146417 N/A N/A 0.074±0.00 0.037±0.00 0.037±0.00 0.038±0.00 0.135±0.15 0.026±0.00 N/A 1.749±0.81 N/A 2.521±1.51 N/A 0.047±0.02
ENSMUST00000149617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175974 N/A N/A 0.072±0.00 N/A N/A N/A N/A 0.094±0.03 1.478±0.33 1.826±0.00 N/A 3.240±1.72 N/A 0.047±0.00
ENSMUST00000176448 0.081±0.00 N/A N/A N/A N/A N/A N/A 0.223±0.09 2.718±1.08 N/A N/A N/A 0.221±0.15 N/A
ENSMUST00000176621 N/A N/A N/A N/A N/A N/A N/A 0.247±0.05 0.237±0.00 N/A N/A N/A N/A N/A

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