C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138760-ENSG00000189157 CGP 9606 4:76158737-76283780
GeneTranscriptPositionBiotype
ENSG00000138760 (SCARB2)
scavenger receptor class B, member 2 		ENST00000264896 (SCARB2-001) 76158737-76213893 protein_coding
ENST00000452464 (SCARB2-002) 76161286-76213603 protein_coding
ENST00000502908 (SCARB2-004) 76180735-76195845 retained_intron
ENST00000509994 (SCARB2-003) 76181014-76213600 nonsense_mediated_decay
ENST00000511129 (SCARB2-005) 76163209-76166864 retained_intron
ENSG00000189157 (FAM47E)
family with sequence similarity 47, member E 		ENST00000424749 (FAM47E-001) 76251741-76283754 protein_coding
ENST00000502320 (FAM47E-002) 76251733-76283779 retained_intron
ENST00000510197 (FAM47E-007) 76214040-76283780 protein_coding
ENST00000510328 (FAM47E-006) 76251700-76278655 retained_intron
ENST00000511946 (FAM47E-011) 76278119-76283774 processed_transcript
ENST00000512895 (FAM47E-009) 76214104-76268769 protein_coding
ENST00000515589 (FAM47E-003) 76236269-76256460 processed_transcript
ENST00000606246 (FAM47E-013) 76256453-76268911 protein_coding
ENST00000606550 (FAM47E-012) 76267506-76269614 retained_intron
ENSG00000272414 (FAM47E-STBD1)
FAM47E-STBD1 readthrough 		ENST00000509377 (FAM47E-STBD1-003) 76251733-76310044 nonsense_mediated_decay
ENST00000514140 (FAM47E-STBD1-001) 76263812-76311129 protein_coding
ENST00000514365 (FAM47E-STBD1-002) 76251732-76310379 nonsense_mediated_decay
ENST00000515604 (FAM47E-STBD1-004) 76251721-76311120 protein_coding
CIL_00071J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029426-ENSMUSG00000057068 CGP 10090 5:92443873-92591279
GeneTranscriptPositionBiotype
ENSMUSG00000029426 (Scarb2)
scavenger receptor class B, member 2 		ENSMUST00000031377 (Scarb2-201) 92443873-92505608 protein_coding
ENSMUSG00000057068 (Fam47e)
family with sequence similarity 47, member E 		ENSMUST00000082382 (Fam47e-005) 92571556-92590731 protein_coding
ENSMUST00000131166 (Fam47e-001) 92571537-92591279 protein_coding
ENSMUST00000146417 (Fam47e-002) 92555069-92590760 protein_coding
ENSMUST00000149617 (Fam47e-003) 92555102-92590660 nonsense_mediated_decay
ENSMUST00000175974 (Fam47e-004) 92571536-92591278 protein_coding
ENSMUST00000176448 (Fam47e-006) 92571543-92585384 protein_coding
ENSMUST00000176621 (Fam47e-007) 92571477-92590882 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071J_0001ENSG00000138760ENST00000264896ENST00000452464ENST00000502908ENST00000509994ENST00000511129ENSG00000189157ENST00000424749ENST00000502320ENST00000510197ENST00000510328ENST00000511946ENST00000512895ENST00000515589ENST00000606246ENST00000606550ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604CIL_00071J_0002ENSMUSG00000029426ENSMUST00000031377ENSMUSG00000057068ENSMUST00000082382ENSMUST00000131166ENSMUST00000146417ENSMUST00000149617ENSMUST00000175974ENSMUST00000176448ENSMUST00000176621
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071J_0001ENSG00000138760ENST00000264896ENST00000452464ENSG00000189157ENST00000424749ENST00000502320ENSG00000272414ENST00000509377ENST00000514140ENST00000514365ENST00000515604CIL_00071J_0002ENSMUSG00000029426ENSMUST00000031377ENSMUSG00000057068ENSMUST00000082382ENSMUST00000131166ENSMUST00000146417ENSMUST00000175974ENSMUST00000176448ENSMUST00000176621
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138760 ENST00000264896 36.775±0.00 21.098±0.00 14.942±0.00 43.827±5.59 39.206±7.46 34.420±7.75 12.844±5.20 28.397±4.98 31.994±4.83 39.667±5.18 26.805±15.25 31.006±8.30 40.457±3.69 22.355±10.13
ENST00000452464 N/A N/A N/A N/A N/A N/A 11.755±0.00 N/A N/A N/A 38.206±0.00 12.263±0.00 19.110±0.00 N/A
ENST00000502908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189157 ENST00000424749 N/A N/A 0.980±0.00 1.019±0.00 N/A N/A N/A 2.599±0.00 N/A N/A N/A N/A N/A N/A
ENST00000502320 N/A N/A N/A 1.392±0.00 N/A N/A 0.139±0.00 0.476±0.00 N/A N/A N/A N/A N/A 0.903±0.00
ENST00000510197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272414 ENST00000509377 N/A N/A 0.505±0.00 N/A N/A N/A N/A N/A N/A 0.882±0.00 N/A N/A N/A N/A
ENST00000514140 N/A 2.345±0.00 N/A N/A N/A 2.225±0.00 0.997±0.00 1.507±0.00 N/A N/A N/A 3.788±1.14 3.051±1.55 3.103±0.00
ENST00000514365 N/A 1.706±0.00 N/A N/A N/A N/A N/A N/A 2.333±0.00 N/A N/A 4.475±0.00 6.419±0.00 3.305±0.00
ENST00000515604 N/A N/A N/A 3.165±0.00 N/A N/A N/A N/A N/A 4.751±0.00 N/A 0.755±0.00 N/A 2.772±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029426 ENSMUST00000031377 15.490±5.78 34.173±3.23 32.333±12.81 10.394±2.59 25.130±12.38 27.460±0.96 15.318±3.59 5.018±0.74 10.389±6.17 35.318±11.80 7.431±0.99 32.579±9.97 20.329±5.85 2.648±0.91
ENSMUSG00000057068 ENSMUST00000082382 N/A 0.116±0.00 N/A N/A N/A 0.114±0.00 N/A 0.112±0.00 0.252±0.00 N/A N/A N/A N/A N/A
ENSMUST00000131166 N/A N/A N/A N/A N/A N/A N/A N/A 1.747±1.12 N/A N/A 1.228±0.45 0.169±0.10 N/A
ENSMUST00000146417 N/A N/A 0.074±0.00 0.037±0.00 0.037±0.00 0.038±0.00 0.135±0.15 0.026±0.00 N/A 1.749±0.81 N/A 2.521±1.51 N/A 0.047±0.02
ENSMUST00000149617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175974 N/A N/A 0.072±0.00 N/A N/A N/A N/A 0.094±0.03 1.478±0.33 1.826±0.00 N/A 3.240±1.72 N/A 0.047±0.00
ENSMUST00000176448 0.081±0.00 N/A N/A N/A N/A N/A N/A 0.223±0.09 2.718±1.08 N/A N/A N/A 0.221±0.15 N/A
ENSMUST00000176621 N/A N/A N/A N/A N/A N/A N/A 0.247±0.05 0.237±0.00 N/A N/A N/A N/A N/A

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