C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin-like 4A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057130 Txnl4a 10090 + 18:80206795-80223533 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025464 Txnl4a-003 80206863-80222202 protein_coding
  ENSMUST00000126360 Txnl4a-002 80206894-80218879 retained_intron
  ENSMUST00000130675 Txnl4a-004 80215380-80222338 processed_transcript
  ENSMUST00000145963 Txnl4a-001 80206795-80223533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000130675ENSMUST00000145963
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130675 N/A 79.813±0.00 N/A N/A N/A N/A N/A N/A N/A 94.575±0.00 183.765±80.00 73.586±0.00
ENSMUST00000145963 12.527±1.80 12.916±5.29 10.951±3.55 11.231±1.85 7.200±0.33 9.641±0.92 12.871±0.60 9.364±0.15 4.316±0.39 13.595±9.82 17.517±6.25 5.513±2.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0002 VISTA 18:80030119-80632361

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0007067 IEA mitotic nuclear division
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036190 txnl4a thioredoxin-like 4A protein_coding Danio_rerio
ENSG00000141759 TXNL4A thioredoxin-like 4A protein_coding Homo_sapiens

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