C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-like 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130675 Txnl4a-004 ENSMUSG00000057130 10090 + 18:80215380-80222338 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000130675
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000130675 79.813±0.00 94.575±0.00 183.765±80.00 73.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0002 VISTA 18:80030119-80632361

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269601 TXNL4A-001 protein_coding Homo_sapiens 0 339
ENST00000355491 TXNL4A-008 nonsense_mediated_decay Homo_sapiens 6e-34 148
ENST00000585474 TXNL4A-002 protein_coding Homo_sapiens 0 337
ENST00000585769 TXNL4A-003 nonsense_mediated_decay Homo_sapiens 1e-32 145
ENST00000586295 TXNL4A-005 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000586825 TXNL4A-009 nonsense_mediated_decay Homo_sapiens 6e-33 145
ENST00000591711 TXNL4A-007 protein_coding Homo_sapiens 5e-34 148
ENST00000592837 TXNL4A-012 protein_coding Homo_sapiens 0 337
ENST00000592957 TXNL4A-004 protein_coding Homo_sapiens 0 333

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