C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulatory factor X 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057173 Rfx8 10090 - 1:39665306-39720997 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000126760 Rfx8-002 39680932-39691871 processed_transcript
  ENSMUST00000151913 Rfx8-001 39665306-39720997 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126760ENSMUST00000151913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126760 N/A N/A N/A 0.063±0.00 0.155±0.00 N/A N/A 0.030±0.00 0.070±0.06 N/A 0.084±0.00 0.594±0.00 0.034±0.00 N/A
ENSMUST00000151913 0.198±0.16 0.100±0.04 0.068±0.02 0.085±0.01 0.020±0.00 0.080±0.04 0.184±0.02 0.024±0.00 0.033±0.02 0.134±0.06 0.027±0.00 0.163±0.08 0.078±0.07 21.709±1.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0002 VISTA 1:39141367-39744845
CIL_0004QX CIL_0004QX_0002 CGP 1:39618406-39720997

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196460 RFX8 RFX family member 8, lacking RFX DNA binding domain protein_coding Homo_sapiens

Loading