C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004QX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175874-ENSG00000196460 CGP 9606 2:101345551-101474703
GeneTranscriptPositionBiotype
ENSG00000175874 (CREG2)
cellular repressor of E1A-stimulated genes 2 		ENST00000324768 (CREG2-001) 101345551-101387595 protein_coding
ENST00000486966 (CREG2-003) 101382926-101387466 processed_transcript
ENST00000495455 (CREG2-002) 101382079-101387140 processed_transcript
ENSG00000196460 (RFX8)
RFX family member 8, lacking RFX DNA binding domain 		ENST00000428343 (RFX8-001) 101397404-101474703 protein_coding
ENST00000481179 (RFX8-003) 101397361-101474703 nonsense_mediated_decay
ENST00000484091 (RFX8-004) 101421698-101474701 nonsense_mediated_decay
ENST00000492238 (RFX8-005) 101421383-101435106 retained_intron
ENSG00000226058 (AC092570.1)
 ENST00000414446 (AC092570.1-001) 101375587-101376055 processed_pseudogene
CIL_0004QX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050967-ENSMUSG00000057173 CGP 10090 1:39618406-39720997
GeneTranscriptPositionBiotype
ENSMUSG00000050967 (Creg2)
cellular repressor of E1A-stimulated genes 2 		ENSMUST00000053355 (Creg2-201) 39618406-39651182 protein_coding
ENSMUSG00000057173 (Rfx8)
regulatory factor X 8 		ENSMUST00000126760 (Rfx8-002) 39680932-39691871 processed_transcript
ENSMUST00000151913 (Rfx8-001) 39665306-39720997 protein_coding
ENSMUSG00000097083 (D930019O06Rik)
RIKEN cDNA D930019O06 		ENSMUST00000181841 (D930019O06Rik-201) 39650176-39657390 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QX_0001ENSG00000175874ENST00000324768ENST00000486966ENST00000495455ENSG00000196460ENST00000428343ENST00000481179ENST00000484091ENST00000492238ENSG00000226058ENST00000414446CIL_0004QX_0002ENSMUSG00000050967ENSMUST00000053355ENSMUSG00000057173ENSMUST00000126760ENSMUST00000151913ENSMUSG00000097083ENSMUST00000181841
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004QX_0001ENSG00000175874ENST00000324768ENST00000486966ENST00000495455ENSG00000196460ENST00000428343ENST00000481179ENST00000484091ENST00000492238ENSG00000226058ENST00000414446CIL_0004QX_0002ENSMUSG00000050967ENSMUST00000053355ENSMUSG00000057173ENSMUST00000126760ENSMUST00000151913ENSMUSG00000097083ENSMUST00000181841
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175874 ENST00000324768 0.008±0.00 0.020±0.00 0.020±0.00 18.687±5.65 0.046±0.03 0.019±0.00 0.007±0.00 0.043±0.00 0.106±0.00 0.015±0.00 0.049±0.04 0.364±0.31 0.010±0.00 0.045±0.01
ENST00000486966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 N/A
ENST00000495455 0.485±0.00 1.138±0.00 N/A N/A 0.563±0.00 0.368±0.00 0.536±0.00 0.765±0.00 0.129±0.00 0.114±0.00 0.032±0.00 0.182±0.00 0.255±0.09 0.479±0.06
ENSG00000196460 ENST00000428343 0.053±0.00 N/A N/A 0.081±0.00 0.147±0.00 N/A 0.010±0.00 0.015±0.00 0.069±0.04 N/A N/A 0.111±0.00 0.060±0.00 N/A
ENST00000481179 0.066±0.00 N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A 0.153±0.00 0.243±0.02 0.066±0.04 0.671±0.18
ENST00000484091 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A 0.508±0.00 N/A N/A 0.084±0.00 N/A
ENST00000492238 0.048±0.00 0.121±0.00 N/A N/A 0.220±0.00 N/A 0.043±0.00 N/A N/A N/A N/A 0.048±0.00 0.069±0.01 0.771±0.35
ENSG00000226058 ENST00000414446 N/A N/A N/A 0.060±0.00 N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000050967 ENSMUST00000053355 0.058±0.04 0.033±0.02 0.032±0.00 4.611±5.03 0.189±0.07 0.070±0.05 0.022±0.00 0.035±0.02 0.006±0.00 0.049±0.02 0.014±0.01 0.225±0.09 0.009±0.01 0.067±0.01
ENSMUSG00000057173 ENSMUST00000126760 N/A N/A N/A 0.063±0.00 0.155±0.00 N/A N/A 0.030±0.00 0.070±0.06 N/A 0.084±0.00 0.594±0.00 0.034±0.00 N/A
ENSMUST00000151913 0.198±0.16 0.100±0.04 0.068±0.02 0.085±0.01 0.020±0.00 0.080±0.04 0.184±0.02 0.024±0.00 0.033±0.02 0.134±0.06 0.027±0.00 0.163±0.08 0.078±0.07 21.709±1.33
ENSMUSG00000097083 ENSMUST00000181841 0.156±0.14 0.096±0.07 0.016±0.00 0.319±0.00 0.469±0.24 0.126±0.06 0.008±0.00 0.025±0.01 0.012±0.01 0.101±0.06 0.018±0.01 1.213±0.33 0.052±0.03 0.073±0.03

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