C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3 domain containing ring finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000072008 Sh3rf2-001 ENSMUSG00000057719 10090 + 18:42053667-42158960 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000072008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000072008 0.301±0.06 0.112±0.04 0.476±0.20 0.987±0.00 0.418±0.37 1.055±0.43 1.589±1.10 0.045±0.00 0.013±0.01 4.196±0.22 3.276±1.63 0.085±0.04 0.842±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AJ CIL_0001AJ_0002 CGP 18:41986201-42158960

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005575 ND cellular_component
GO:0008157 ISS protein phosphatase 1 binding
GO:0008270 IEA zinc ion binding
GO:0010923 ISS negative regulation of phosphatase activity
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019902 ISS phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359120 SH3RF2-001 protein_coding Homo_sapiens 0 2198
ENST00000503848 SH3RF2-006 processed_transcript Homo_sapiens 0 364
ENST00000504522 SH3RF2-008 retained_intron Homo_sapiens 0 436
ENST00000511217 SH3RF2-002 protein_coding Homo_sapiens 0 2119
ENST00000511705 SH3RF2-003 processed_transcript Homo_sapiens 0 780

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