C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, beta 2 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057914 Cacnb2 10090 + 2:14604306-14987908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114718 Cacnb2-006 14873656-14971646 protein_coding
  ENSMUST00000114719 Cacnb2-007 14873820-14986149 protein_coding
  ENSMUST00000114723 Cacnb2-004 14604306-14987908 protein_coding
  ENSMUST00000123719 Cacnb2-003 14873993-14963667 processed_transcript
  ENSMUST00000137746 Cacnb2-005 14763129-14961691 processed_transcript
  ENSMUST00000144423 Cacnb2-008 14982113-14984414 processed_transcript
  ENSMUST00000148676 Cacnb2-001 14605116-14962799 processed_transcript
  ENSMUST00000156027 Cacnb2-002 14605116-14961042 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114718ENSMUST00000114719ENSMUST00000114723ENSMUST00000123719ENSMUST00000144423ENSMUST00000156027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114718 N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A
ENSMUST00000114719 1.586±1.26 4.588±2.23 N/A 2.758±2.47 0.077±0.00 0.812±0.11 7.381±0.86 0.286±0.09 0.083±0.08 1.538±0.56 0.027±0.00 3.126±0.96 0.290±0.04 0.201±0.08
ENSMUST00000114723 0.958±0.78 3.193±1.03 4.731±1.90 2.240±1.59 0.068±0.03 0.688±0.10 2.408±0.41 0.343±0.14 0.066±0.05 1.037±0.19 0.068±0.02 1.406±0.45 1.425±0.00 0.102±0.02
ENSMUST00000123719 N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.014±0.00 N/A N/A N/A
ENSMUST00000144423 N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.00 N/A 0.033±0.00 N/A N/A N/A
ENSMUST00000156027 N/A N/A N/A N/A 0.237±0.18 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AA CIL_0005AA_0002 CGP 2:14388316-14987908
CIL_0005A3 CIL_0005A3_0002 CGP 2:14604306-15054884

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005891 IDA voltage-gated calcium channel complex
GO:0007268 IMP synaptic transmission
GO:0007601 IMP visual perception
GO:0008331 TAS high voltage-gated calcium channel activity
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051928 IEA positive regulation of calcium ion transport
GO:0070509 IEA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079906 cacnb2a calcium channel, voltage-dependent, beta 2a protein_coding Danio_rerio
ENSG00000165995 CACNB2 calcium channel, voltage-dependent, beta 2 subunit protein_coding Homo_sapiens

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