C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000059070 Rpl18 10090 + 7:45715457-45720835 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072503 Rpl18-201 45718071-45720835 protein_coding
  ENSMUST00000075178 Rpl18-001 45715457-45720834 protein_coding
  ENSMUST00000135500 Rpl18-002 45718157-45720828 protein_coding
  ENSMUST00000141618 Rpl18-004 45720155-45720830 retained_intron
  ENSMUST00000148510 Rpl18-003 45719152-45720125 retained_intron
  ENSMUST00000172506 Rpl18-008 45719262-45720785 retained_intron
  ENSMUST00000173098 Rpl18-007 45719209-45720357 protein_coding
  ENSMUST00000173864 Rpl18-006 45719621-45720830 protein_coding
  ENSMUST00000174157 Rpl18-005 45719596-45720827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000072503ENSMUST00000173098
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000072503 461.788±190.52 385.805±33.85 317.003±30.75 272.599±24.82 516.231±205.86 869.802±86.29 220.016±30.32 349.805±26.05 315.310±189.37 471.248±20.14 204.931±37.40 530.902±126.53 351.787±140.48 211.374±88.17
ENSMUST00000173098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 626.029±4.16 608.964±292.58 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005840 IEA ribosome
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0022625 IEA cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029533 rpl18 ribosomal protein L18 protein_coding Danio_rerio
ENSG00000063177 RPL18 ribosomal protein L18 protein_coding Homo_sapiens

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