C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173098 Rpl18-007 ENSMUSG00000059070 10090 + 7:45719209-45720357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000173098
Transcript ID Ovary Placenta
ENSMUST00000173098 626.029±4.16 608.964±292.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000084795 RPL18-006 protein_coding Homo_sapiens 0 436
ENST00000422478 RP11-709P2.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000478088 RPL18P13-001 processed_pseudogene Homo_sapiens 0 375
ENST00000486306 RP11-313M3.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000497218 RP11-286B5.1-001 processed_pseudogene Homo_sapiens 0 191
ENST00000547892 RPL18-003 retained_intron Homo_sapiens 1e-27 130
ENST00000547897 RPL18-010 non_stop_decay Homo_sapiens 0 357
ENST00000549273 RPL18-014 protein_coding Homo_sapiens 0 431
ENST00000549370 RPL18-009 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000549920 RPL18-001 protein_coding Homo_sapiens 0 431
ENST00000550645 RPL18-012 protein_coding Homo_sapiens 0 359
ENST00000550671 RPL18-007 retained_intron Homo_sapiens 5e-25 119
ENST00000550973 RPL18-013 protein_coding Homo_sapiens 0 429
ENST00000551749 RPL18-004 retained_intron Homo_sapiens 0 246
ENST00000552347 RPL18-005 retained_intron Homo_sapiens 0 246
ENST00000552705 RPL18-002 retained_intron Homo_sapiens 0 363

Loading