C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of calcineurin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030606 Rcan3-001 ENSMUSG00000059713 10090 - 4:135412308-135433853 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030606 5.475±1.91 6.125±1.55 7.999±0.19 8.523±3.92 6.040±1.26 8.104±2.61 1.807±0.63 4.157±1.51 1.075±0.50 6.295±0.65 0.866±0.35 5.614±2.23 4.513±2.02 0.855±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZX CIL_0007ZX_0002 VISTA 4:134905845-135507207
CIL_0007CU CIL_0007CU_0002 CGP 4:135412308-135495038

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0019722 IEA calcium-mediated signaling
GO:0031013 IEA troponin I binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326631 PLEKHJ1-201 protein_coding Homo_sapiens 0.000006 57
ENST00000586608 PLEKHJ1-007 protein_coding Homo_sapiens 0.000005 57
ENST00000587962 PLEKHJ1-011 protein_coding Homo_sapiens 0.000007 57
ENST00000588450 PLEKHJ1-003 retained_intron Homo_sapiens 0.00001 57
ENST00000588545 PLEKHJ1-006 retained_intron Homo_sapiens 0.000004 57
ENST00000588633 PLEKHJ1-010 processed_transcript Homo_sapiens 0.000002 57
ENST00000589097 PLEKHJ1-001 protein_coding Homo_sapiens 0.00001 57
ENST00000589791 PLEKHJ1-002 processed_transcript Homo_sapiens 0.000007 57
ENST00000591099 PLEKHJ1-008 protein_coding Homo_sapiens 0.000005 57

Loading