C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tumor protein, translationally-controlled 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060126 Tpt1 10090 + 14:75845093-75848525 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110894 Tpt1-001 75845093-75848415 protein_coding
  ENSMUST00000125146 Tpt1-008 75846185-75846987 retained_intron
  ENSMUST00000128889 Tpt1-004 75845332-75845969 retained_intron
  ENSMUST00000134040 Tpt1-005 75845900-75848297 processed_transcript
  ENSMUST00000142061 Tpt1-002 75845302-75848525 protein_coding
  ENSMUST00000150047 Tpt1-003 75845331-75846892 retained_intron
  ENSMUST00000151751 Tpt1-007 75845919-75846777 retained_intron
  ENSMUST00000154533 Tpt1-006 75845355-75847088 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110894ENSMUST00000134040ENSMUST00000142061ENSMUST00000150047ENSMUST00000154533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110894 105.026±49.32 N/A 766.241±367.90 388.874±177.53 71.366±38.05 N/A 196.208±84.45 113.160±35.31 738.385±170.73 N/A 1017.916±105.42 597.853±85.41 739.066±154.59 136.971±22.59
ENSMUST00000134040 422.788±5.18 N/A 831.868±0.00 143.786±0.00 315.905±0.00 N/A 152.835±0.00 184.502±35.14 433.534±0.00 265.408±1.05 203.822±26.64 1507.015±161.20 702.986±27.55 N/A
ENSMUST00000142061 60.714±0.00 N/A N/A N/A N/A N/A N/A N/A 101.004±0.00 N/A N/A 270.885±0.05 N/A N/A
ENSMUST00000150047 1036.530±490.22 3871.178±657.23 N/A N/A 1870.558±915.24 2471.172±153.93 289.044±142.72 738.927±268.39 1099.268±72.99 1205.426±439.02 N/A 3927.855±1389.78 N/A 233.849±4.26
ENSMUST00000154533 197.189±93.73 N/A 501.063±0.00 177.968±47.76 685.185±0.00 N/A 187.266±80.69 198.193±5.35 252.035±1.13 N/A N/A 918.260±0.00 385.594±89.55 93.733±25.14

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005615 ISO extracellular space
GO:0005634 IEA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005771 ISO multivesicular body
GO:0008134 IPI transcription factor binding
GO:0009615 IEA response to virus
GO:0019827 IMP stem cell maintenance
GO:0044822 IEA poly(A) RNA binding
GO:0045298 IEA tubulin complex
GO:0070062 IEA extracellular vesicular exosome
GO:1902230 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000384 IMP negative regulation of ectoderm development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092693 tpt1 tumor protein, translationally-controlled 1 protein_coding Danio_rerio
ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 protein_coding Homo_sapiens

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