C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142061 Tpt1-002 ENSMUSG00000060126 10090 + 14:75845302-75848525 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverOvaryENSMUST00000142061
Transcript ID Adipose Liver Ovary
ENSMUST00000142061 60.714±0.00 101.004±0.00 270.885±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 ISO extracellular space
GO:0005771 ISO multivesicular body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309246 TPT1-004 protein_coding Homo_sapiens 0 521
ENST00000379055 TPT1-003 protein_coding Homo_sapiens 0 558
ENST00000379056 TPT1-002 protein_coding Homo_sapiens 0 852
ENST00000379060 TPT1-011 protein_coding Homo_sapiens 0 675
ENST00000413759 TPT1P9-001 processed_pseudogene Homo_sapiens 0 473
ENST00000442760 TPT1-007 retained_intron Homo_sapiens 2e-24 117
ENST00000458298 TPT1P6-001 processed_pseudogene Homo_sapiens 0 394
ENST00000484604 TPT1-005 retained_intron Homo_sapiens 0 472
ENST00000490277 TPT1-006 retained_intron Homo_sapiens 0 339
ENST00000527226 TPT1-012 protein_coding Homo_sapiens 0 488
ENST00000528619 TPT1-008 protein_coding Homo_sapiens 0 226
ENST00000529421 TPT1-013 processed_transcript Homo_sapiens 0 701
ENST00000530245 TPT1-009 protein_coding Homo_sapiens 0 226
ENST00000530705 TPT1-001 protein_coding Homo_sapiens 0 701
ENST00000533567 TPT1-010 retained_intron Homo_sapiens 0 335
ENST00000616577 TPT1-201 protein_coding Homo_sapiens 0 521

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