C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110894 Tpt1-001 ENSMUSG00000060126 10090 + 14:75845093-75848415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000110894
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000110894 105.026±49.32 766.241±367.90 388.874±177.53 71.366±38.05 196.208±84.45 113.160±35.31 738.385±170.73 1017.916±105.42 597.853±85.41 739.066±154.59 136.971±22.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005615 ISO extracellular space
GO:0005634 IEA nucleus
GO:0005654 IDA nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005771 ISO multivesicular body
GO:0008134 IPI transcription factor binding
GO:0009615 IEA response to virus
GO:0019827 IMP stem cell maintenance
GO:0044822 IEA poly(A) RNA binding
GO:0045298 IEA tubulin complex
GO:0070062 IEA extracellular vesicular exosome
GO:1902230 IEA negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000384 IMP negative regulation of ectoderm development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309246 TPT1-004 protein_coding Homo_sapiens 0 680
ENST00000379055 TPT1-003 protein_coding Homo_sapiens 0 669
ENST00000379056 TPT1-002 protein_coding Homo_sapiens 0 701
ENST00000379060 TPT1-011 protein_coding Homo_sapiens 0 821
ENST00000413759 TPT1P9-001 processed_pseudogene Homo_sapiens 0 573
ENST00000442760 TPT1-007 retained_intron Homo_sapiens 0 224
ENST00000458298 TPT1P6-001 processed_pseudogene Homo_sapiens 0 507
ENST00000484604 TPT1-005 retained_intron Homo_sapiens 0 472
ENST00000490277 TPT1-006 retained_intron Homo_sapiens 0 339
ENST00000527226 TPT1-012 protein_coding Homo_sapiens 0 599
ENST00000528619 TPT1-008 protein_coding Homo_sapiens 0 226
ENST00000529421 TPT1-013 processed_transcript Homo_sapiens 0 701
ENST00000530245 TPT1-009 protein_coding Homo_sapiens 0 226
ENST00000530705 TPT1-001 protein_coding Homo_sapiens 0 1014
ENST00000533567 TPT1-010 retained_intron Homo_sapiens 0 335
ENST00000616577 TPT1-201 protein_coding Homo_sapiens 0 822

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