C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134977 Atp8b4-003 ENSMUSG00000060131 10090 - 2:126371539-126491553 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMusclePlacentaENSMUST00000134977
Transcript ID Colon Muscle Placenta
ENSMUST00000134977 0.092±0.01 0.013±0.00 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0002 CGP 2:126320973-126588243

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284509 ATP8B4-201 protein_coding Homo_sapiens 0 2311
ENST00000557955 ATP8B4-003 nonsense_mediated_decay Homo_sapiens 0 2311
ENST00000558024 ATP8B4-016 protein_coding Homo_sapiens 0 340
ENST00000558458 ATP8B4-011 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000558906 ATP8B4-002 nonsense_mediated_decay Homo_sapiens 0 1131
ENST00000558959 ATP8B4-010 processed_transcript Homo_sapiens 0 721
ENST00000559726 ATP8B4-007 nonsense_mediated_decay Homo_sapiens 0 1910
ENST00000559829 ATP8B4-001 protein_coding Homo_sapiens 0 2311

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