C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040128 Atp8b4-001 ENSMUSG00000060131 10090 - 2:126320973-126499847 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040128
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040128 0.363±0.00 0.133±0.05 0.090±0.05 0.092±0.05 0.457±0.17 0.517±0.50 0.328±0.00 0.027±0.01 0.219±0.05 0.047±0.02 0.127±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0002 CGP 2:126320973-126588243

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003674 ND molecular_function
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284509 ATP8B4-201 protein_coding Homo_sapiens 0 3807
ENST00000557955 ATP8B4-003 nonsense_mediated_decay Homo_sapiens 0 2311
ENST00000558024 ATP8B4-016 protein_coding Homo_sapiens 0 340
ENST00000558203 ATP8B4-014 retained_intron Homo_sapiens 0 907
ENST00000558458 ATP8B4-011 nonsense_mediated_decay Homo_sapiens 0 272
ENST00000558498 ATP8B4-006 protein_coding Homo_sapiens 0 833
ENST00000558906 ATP8B4-002 nonsense_mediated_decay Homo_sapiens 0 2047
ENST00000558959 ATP8B4-010 processed_transcript Homo_sapiens 0 721
ENST00000559726 ATP8B4-007 nonsense_mediated_decay Homo_sapiens 0 3408
ENST00000559829 ATP8B4-001 protein_coding Homo_sapiens 0 3807
ENST00000560354 ATP8B4-015 retained_intron Homo_sapiens 0 560
ENST00000560479 ATP8B4-005 protein_coding Homo_sapiens 0 1500

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