C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060373 Hnrnpc 10090 - 14:52073380-52104028 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000111610 Hnrnpc-201 52073380-52104028 protein_coding
  ENSMUST00000164655 Hnrnpc-202 52073380-52104028 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111610
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111610 25.286±14.05 20.331±4.63 24.700±12.31 27.591±4.38 23.879±2.29 21.775±5.37 17.024±3.52 20.882±4.80 30.749±23.48 25.791±7.96 5.154±0.92 34.998±12.07 44.032±16.04 14.138±3.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027N CIL_00027N_0002 CGP 14:52035082-52104028
CIL_00027O CIL_00027O_0002 CGP 14:52073380-52163546

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IDA mRNA binding
GO:0005634 IDA nucleus
GO:0005681 ISS spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0045120 IDA pronucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022579 zgc:55733 zgc:55733 protein_coding Danio_rerio
ENSDARG00000053810 hnrnpc heterogeneous nuclear ribonucleoprotein C protein_coding Danio_rerio
ENSG00000092199 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) protein_coding Homo_sapiens
ENSG00000179172 HNRNPCL1 heterogeneous nuclear ribonucleoprotein C-like 1 protein_coding Homo_sapiens
ENSG00000179412 HNRNPCL2 heterogeneous nuclear ribonucleoprotein C-like 4 protein_coding Homo_sapiens
ENSG00000275774 HNRNPCL2 heterogeneous nuclear ribonucleoprotein C-like 2 protein_coding Homo_sapiens
ENSG00000277058 CH17-409J4.1 heterogeneous nuclear ribonucleoprotein C-like 3 protein_coding Homo_sapiens

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