C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000092199-ENSG00000092200 CGP 9606 14:21209136-21351301
GeneTranscriptPositionBiotype
ENSG00000092199 (HNRNPC)
heterogeneous nuclear ribonucleoprotein C (C1/C2) 		ENST00000336053 (HNRNPC-001) 21209136-21269494 protein_coding
ENST00000420743 (HNRNPC-006) 21211106-21269425 protein_coding
ENST00000430246 (HNRNPC-015) 21210556-21265516 protein_coding
ENST00000449098 (HNRNPC-201) 21210556-21234245 protein_coding
ENST00000553300 (HNRNPC-002) 21210937-21269442 protein_coding
ENST00000553444 (HNRNPC-032) 21210937-21212002 retained_intron
ENST00000553614 (HNRNPC-024) 21230898-21269423 retained_intron
ENST00000553753 (HNRNPC-014) 21210582-21269403 protein_coding
ENST00000554383 (HNRNPC-027) 21211418-21269442 protein_coding
ENST00000554417 (HNRNPC-025) 21211490-21230660 retained_intron
ENST00000554455 (HNRNPC-005) 21210550-21269425 protein_coding
ENST00000554539 (HNRNPC-021) 21211256-21269445 protein_coding
ENST00000554891 (HNRNPC-030) 21213105-21269392 protein_coding
ENST00000554969 (HNRNPC-017) 21210534-21269425 protein_coding
ENST00000555127 (HNRNPC-026) 21262993-21269389 retained_intron
ENST00000555137 (HNRNPC-033) 21212997-21269411 protein_coding
ENST00000555176 (HNRNPC-034) 21230332-21268651 protein_coding
ENST00000555215 (HNRNPC-028) 21212961-21269409 protein_coding
ENST00000555309 (HNRNPC-010) 21210613-21269421 protein_coding
ENST00000555585 (HNRNPC-031) 21211459-21213419 retained_intron
ENST00000555883 (HNRNPC-016) 21210933-21269400 protein_coding
ENST00000555914 (HNRNPC-011) 21210613-21269404 protein_coding
ENST00000556142 (HNRNPC-020) 21210546-21269423 protein_coding
ENST00000556226 (HNRNPC-035) 21230319-21269411 protein_coding
ENST00000556513 (HNRNPC-018) 21210933-21269425 protein_coding
ENST00000556628 (HNRNPC-022) 21210923-21269410 protein_coding
ENST00000556897 (HNRNPC-019) 21210966-21262677 protein_coding
ENST00000557033 (HNRNPC-023) 21262603-21269442 retained_intron
ENST00000557157 (HNRNPC-037) 21211224-21231422 protein_coding
ENST00000557201 (HNRNPC-007) 21210937-21269425 protein_coding
ENST00000557336 (HNRNPC-029) 21233995-21269406 protein_coding
ENST00000557442 (HNRNPC-008) 21210904-21269424 nonsense_mediated_decay
ENST00000557768 (HNRNPC-036) 21234031-21269425 protein_coding
ENSG00000092200 (RPGRIP1)
retinitis pigmentosa GTPase regulator interacting protein 1 		ENST00000382933 (RPGRIP1-002) 21317539-21351301 protein_coding
ENST00000400017 (RPGRIP1-001) 21287977-21351295 protein_coding
ENST00000553500 (RPGRIP1-007) 21320151-21325867 processed_transcript
ENST00000553927 (RPGRIP1-005) 21323924-21351298 retained_intron
ENST00000554303 (RPGRIP1-008) 21321373-21324898 protein_coding
ENST00000554750 (RPGRIP1-013) 21301149-21302969 retained_intron
ENST00000555322 (RPGRIP1-004) 21321359-21351301 nonsense_mediated_decay
ENST00000555489 (RPGRIP1-003) 21321917-21351301 nonsense_mediated_decay
ENST00000555587 (RPGRIP1-009) 21321364-21351301 protein_coding
ENST00000556336 (RPGRIP1-010) 21287939-21351301 protein_coding
ENST00000557351 (RPGRIP1-006) 21317553-21321290 protein_coding
ENST00000557606 (RPGRIP1-012) 21328599-21343165 protein_coding
ENST00000557771 (RPGRIP1-011) 21287939-21351301 protein_coding
CIL_00027O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060373-ENSMUSG00000057132 CGP 10090 14:52073380-52163546
GeneTranscriptPositionBiotype
ENSMUSG00000035726 (Supt16)
suppressor of Ty 16 		ENSMUST00000046709 (Supt16-201) 52160419-52197239 protein_coding
ENSMUSG00000060373 (Hnrnpc)
heterogeneous nuclear ribonucleoprotein C 		ENSMUST00000111610 (Hnrnpc-201) 52073380-52104028 protein_coding
ENSMUST00000164655 (Hnrnpc-202) 52073380-52104028 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027O_0001ENSG00000092199ENST00000336053ENST00000420743ENST00000430246ENST00000449098ENST00000553300ENST00000553444ENST00000553614ENST00000553753ENST00000554383ENST00000554417ENST00000554455ENST00000554539ENST00000554891ENST00000554969ENST00000555127ENST00000555137ENST00000555176ENST00000555215ENST00000555309ENST00000555585ENST00000555883ENST00000555914ENST00000556142ENST00000556226ENST00000556513ENST00000556628ENST00000556897ENST00000557033ENST00000557157ENST00000557201ENST00000557336ENST00000557442ENST00000557768ENSG00000092200ENST00000382933ENST00000400017ENST00000553500ENST00000553927ENST00000554303ENST00000554750ENST00000555322ENST00000555489ENST00000555587ENST00000556336ENST00000557351ENST00000557606ENST00000557771CIL_00027O_0002ENSMUSG00000035726ENSMUST00000046709ENSMUSG00000060373ENSMUST00000111610ENSMUST00000164655
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027O_0001ENSG00000092199ENST00000336053ENST00000430246ENST00000449098ENST00000553300ENST00000554383ENST00000554455ENST00000555883ENST00000556142ENST00000556897ENST00000557157ENST00000557201ENST00000557442ENSG00000092200ENST00000382933ENST00000400017ENST00000553927ENST00000554303ENST00000554750ENST00000555322ENST00000555489ENST00000555587ENST00000556336ENST00000557606CIL_00027O_0002ENSMUSG00000035726ENSMUST00000046709ENSMUSG00000060373ENSMUST00000111610
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092199 ENST00000336053 9.503±0.00 18.413±0.00 N/A 11.503±0.00 9.210±0.00 4.915±0.00 4.580±0.00 14.116±0.00 5.123±1.10 15.605±0.00 3.374±0.00 11.424±0.00 N/A N/A
ENST00000420743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430246 N/A N/A 6.972±0.00 N/A 12.328±0.00 5.298±0.00 4.795±0.00 N/A 6.721±0.00 N/A N/A N/A N/A N/A
ENST00000449098 45.413±0.00 67.811±0.00 N/A N/A 38.798±0.00 88.030±0.00 N/A 47.878±0.00 18.426±0.00 39.581±0.00 22.968±0.00 69.301±8.69 58.343±1.91 76.698±30.14
ENST00000553300 28.970±0.00 N/A N/A 31.507±0.00 22.995±0.00 44.210±31.35 18.404±3.08 79.960±0.00 21.393±1.25 63.803±44.51 29.745±16.73 75.959±30.42 99.057±23.32 N/A
ENST00000553444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554383 N/A N/A 20.329±0.00 31.913±0.00 52.266±0.00 17.288±0.00 N/A 51.585±0.00 N/A 44.890±0.00 N/A N/A N/A N/A
ENST00000554417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554455 N/A 34.415±0.00 N/A N/A 23.843±0.00 N/A 13.566±0.00 N/A N/A N/A N/A 67.413±20.56 36.568±0.00 N/A
ENST00000554539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 64.485±0.00 47.879±0.00
ENST00000555914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556142 N/A N/A N/A 90.312±0.00 N/A 10.240±0.00 10.344±0.00 N/A 10.234±0.00 37.149±0.00 17.929±0.00 N/A N/A N/A
ENST00000556226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 101.305±0.00 189.720±0.00 129.467±0.00
ENST00000557033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557157 N/A N/A 22.720±0.00 43.812±0.00 N/A 17.259±0.00 N/A N/A 27.997±0.00 N/A N/A 69.051±0.00 N/A N/A
ENST00000557201 48.732±0.00 53.399±0.00 N/A N/A 37.569±0.00 92.025±0.00 N/A N/A 13.250±0.00 N/A 8.906±0.00 N/A 58.192±3.57 108.448±0.00
ENST00000557336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557442 N/A N/A N/A N/A N/A N/A N/A N/A 13.070±0.00 N/A N/A N/A N/A N/A
ENST00000557768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000092200 ENST00000382933 N/A 0.203±0.00 N/A 0.129±0.00 0.146±0.00 N/A 0.065±0.00 N/A N/A N/A N/A 0.034±0.02 N/A 27.195±8.30
ENST00000400017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A
ENST00000553500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553927 N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A 0.040±0.00 N/A 0.048±0.00 0.085±0.00 N/A
ENST00000554303 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A N/A
ENST00000554750 N/A N/A N/A 0.068±0.00 N/A 0.074±0.00 0.112±0.00 0.071±0.00 N/A 0.055±0.00 N/A N/A N/A N/A
ENST00000555322 N/A 0.288±0.00 N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.049±0.00 N/A N/A
ENST00000555489 0.206±0.00 N/A 0.080±0.00 0.068±0.00 0.296±0.00 0.072±0.00 N/A N/A 0.092±0.06 0.075±0.00 0.063±0.00 0.049±0.01 0.173±0.10 N/A
ENST00000555587 N/A N/A N/A N/A N/A N/A N/A 0.158±0.13 N/A N/A N/A N/A N/A N/A
ENST00000556336 N/A 0.068±0.00 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000557351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557606 0.310±0.00 N/A N/A N/A 0.246±0.00 N/A 0.470±0.24 N/A N/A N/A N/A N/A N/A N/A
ENST00000557771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035726 ENSMUST00000046709 3.812±2.12 8.418±0.82 9.345±3.64 20.012±4.33 3.870±2.06 4.954±2.27 2.392±0.16 3.099±0.61 13.277±12.36 7.669±2.23 2.671±0.43 9.326±11.06 20.803±8.89 32.544±26.18
ENSMUSG00000060373 ENSMUST00000111610 25.286±14.05 20.331±4.63 24.700±12.31 27.591±4.38 23.879±2.29 21.775±5.37 17.024±3.52 20.882±4.80 30.749±23.48 25.791±7.96 5.154±0.92 34.998±12.07 44.032±16.04 14.138±3.27
ENSMUST00000164655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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