C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 55
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060913 Trim55 10090 + 3:19644460-19691599 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029139 Trim55-201 19644460-19691599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000029139
Transcript ID Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000029139 0.025±0.00 0.409±0.30 0.110±0.07 0.055±0.01 0.337±0.08 0.147±0.06 0.620±0.50 0.068±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BV CIL_0005BV_0003 CGP 3:19644460-19695396

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000029596 trim55a tripartite motif-containing 55a protein_coding Danio_rerio
ENSDARG00000058158 trim55b tripartite motif-containing 55b protein_coding Danio_rerio
ENSG00000147573 TRIM55 tripartite motif containing 55 protein_coding Homo_sapiens

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