C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005BV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058158-ENSDARG00000027657 CGP 7955 24:25439675-25489944
GeneTranscriptPositionBiotype
ENSDARG00000027657 (crhb)
corticotropin releasing hormone b
ENSDART00000038290 (crhb-001) 25455631-25457068 protein_coding
ENSDART00000133649 (crhb-003) 25455791-25457039 protein_coding
ENSDART00000145712 (crhb-002) 25456259-25489944 protein_coding
ENSDARG00000058158 (trim55b)
tripartite motif-containing 55b
ENSDART00000080969 (trim55b-001) 25439675-25454551 protein_coding
CIL_0005BV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147573-ENSG00000147571 CGP 9606 8:66126896-66178725
GeneTranscriptPositionBiotype
ENSG00000147571 (CRH)
corticotropin releasing hormone
ENST00000276571 (CRH-001) 66176382-66178725 protein_coding
ENSG00000147573 (TRIM55)
tripartite motif containing 55
ENST00000276573 (TRIM55-004) 66127043-66174592 protein_coding
ENST00000315962 (TRIM55-001) 66126896-66175487 protein_coding
ENST00000350034 (TRIM55-003) 66127043-66174818 protein_coding
ENST00000353317 (TRIM55-002) 66126896-66175485 protein_coding
ENST00000517647 (TRIM55-006) 66152298-66175005 retained_intron
CIL_0005BV_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000060913-ENSMUSG00000049796 CGP 10090 3:19644460-19695396
GeneTranscriptPositionBiotype
ENSMUSG00000049796 (Crh)
corticotropin releasing hormone
ENSMUST00000061294 (Crh-201) 19693401-19695396 protein_coding
ENSMUSG00000060913 (Trim55)
tripartite motif-containing 55
ENSMUST00000029139 (Trim55-201) 19644460-19691599 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BV_0001ENSDARG00000027657ENSDART00000038290ENSDART00000133649ENSDART00000145712ENSDARG00000058158ENSDART00000080969CIL_0005BV_0002ENSG00000147571ENST00000276571ENSG00000147573ENST00000276573ENST00000315962ENST00000350034ENST00000353317ENST00000517647CIL_0005BV_0003ENSMUSG00000049796ENSMUST00000061294ENSMUSG00000060913ENSMUST00000029139
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BV_0001ENSDARG00000027657ENSDART00000038290ENSDART00000133649ENSDART00000145712ENSDARG00000058158ENSDART00000080969CIL_0005BV_0002ENSG00000147571ENST00000276571ENSG00000147573ENST00000276573ENST00000315962ENST00000350034ENST00000353317ENST00000517647CIL_0005BV_0003ENSMUSG00000049796ENSMUST00000061294ENSMUSG00000060913ENSMUST00000029139
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027657 ENSDART00000038290 N/A N/A 12.867±7.25 N/A N/A 0.891±0.04 0.118±0.00 N/A N/A 1.432±0.00 N/A N/A N/A
ENSDART00000133649 N/A N/A N/A N/A N/A 0.066±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145712 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.625±0.00 N/A N/A N/A
ENSDARG00000058158 ENSDART00000080969 N/A N/A 0.171±0.10 N/A N/A 49.577±58.48 3.021±2.98 0.079±0.00 N/A 64.566±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147571 ENST00000276571 N/A N/A 0.789±0.15 0.045±0.00 N/A N/A N/A N/A N/A N/A 0.028±0.00 45.790±31.88 0.191±0.00
ENSG00000147573 ENST00000276573 N/A 0.035±0.00 N/A 0.064±0.04 N/A 8.397±0.00 0.337±0.00 3.308±0.00 N/A 2.816±0.79 0.016±0.00 0.102±0.04 2.863±1.78
ENST00000315962 N/A N/A N/A 0.351±0.00 N/A N/A N/A N/A N/A 1.591±0.00 N/A N/A N/A
ENST00000350034 N/A N/A 0.039±0.00 0.320±0.00 0.083±0.00 2.136±0.00 4.381±0.00 N/A 0.224±0.00 3.349±0.00 N/A N/A 4.782±0.00
ENST00000353317 0.028±0.00 N/A 0.054±0.00 N/A 0.036±0.00 9.310±0.00 0.610±0.00 3.448±0.00 0.114±0.06 N/A 0.647±0.00 N/A 2.218±0.82
ENST00000517647 N/A 0.009±0.00 N/A 0.222±0.00 N/A N/A 0.353±0.00 3.914±0.00 N/A 1.590±0.04 0.415±0.00 0.087±0.05 3.450±0.10
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049796 ENSMUST00000061294 N/A 0.040±0.01 1.041±0.57 N/A N/A 0.054±0.00 N/A 0.023±0.01 N/A 0.090±0.02 0.049±0.00 0.005±0.00 0.029±0.00
ENSMUSG00000060913 ENSMUST00000029139 N/A N/A 0.025±0.00 0.409±0.30 N/A N/A 0.110±0.07 0.055±0.01 0.337±0.08 N/A 0.147±0.06 0.620±0.50 0.068±0.04

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