C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029139 Trim55-201 ENSMUSG00000060913 10090 + 3:19644460-19691599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000029139
Transcript ID Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000029139 0.025±0.00 0.409±0.30 0.110±0.07 0.055±0.01 0.337±0.08 0.147±0.06 0.620±0.50 0.068±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BV CIL_0005BV_0003 CGP 3:19644460-19695396

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0042802 ISS identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276573 TRIM55-004 protein_coding Homo_sapiens 0 1628
ENST00000315962 TRIM55-001 protein_coding Homo_sapiens 0 1823
ENST00000350034 TRIM55-003 protein_coding Homo_sapiens 0 833
ENST00000353317 TRIM55-002 protein_coding Homo_sapiens 0 1328

Loading