C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted pseudogene 10093
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061062 Gm10093 10090 + 17:78491565-78493541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000079363 Gm10093-201 78491565-78493541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079363
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079363 3.088±0.94 0.819±0.20 0.774±0.16 0.531±0.26 2.126±0.22 1.825±0.87 0.444±0.12 1.618±0.17 1.120±0.64 1.482±0.38 0.066±0.04 3.227±1.70 3.001±3.81 2.316±1.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0032041 IEA NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0046969 IEA NAD-dependent histone deacetylase activity (H3-K9 specific)
GO:0046970 IEA NAD-dependent histone deacetylase activity (H4-K16 specific)
GO:0070932 IEA histone H3 deacetylation
GO:0070933 IEA histone H4 deacetylation
GO:0097372 IEA NAD-dependent histone deacetylase activity (H3-K18 specific)

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015427 hdac1 histone deacetylase 1 protein_coding Danio_rerio
ENSG00000116478 HDAC1 histone deacetylase 1 protein_coding Homo_sapiens

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