C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain 61
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061559 Wdr61 10090 - 9:54714735-54734519 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051822 Wdr61-001 54717159-54734517 protein_coding
  ENSMUST00000118771 Wdr61-004 54714735-54734482 protein_coding
  ENSMUST00000121204 Wdr61-002 54717164-54734519 protein_coding
  ENSMUST00000127451 Wdr61-005 54722874-54734502 protein_coding
  ENSMUST00000130368 Wdr61-003 54717159-54734497 protein_coding
  ENSMUST00000144365 Wdr61-007 54719220-54720814 retained_intron
  ENSMUST00000148494 Wdr61-006 54722525-54724357 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051822ENSMUST00000118771ENSMUST00000121204ENSMUST00000130368
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051822 14.670±1.95 4.968±0.00 44.581±7.37 19.897±3.48 7.514±2.36 9.020±3.54 N/A 15.326±2.69 26.414±12.12 11.451±0.72 N/A 23.253±6.71 59.325±26.89 N/A
ENSMUST00000118771 5.957±0.98 2.785±0.49 7.539±0.11 2.980±0.35 3.899±1.67 1.919±0.73 6.425±1.63 4.105±0.44 6.924±3.44 6.877±2.11 10.535±0.00 7.642±1.23 N/A 6.422±0.00
ENSMUST00000121204 N/A N/A 15.189±0.00 11.066±0.05 N/A 4.940±0.48 N/A 6.236±0.85 8.785±2.89 N/A N/A N/A 18.062±1.14 N/A
ENSMUST00000130368 N/A 10.393±3.83 N/A 10.467±0.00 8.148±0.26 N/A N/A N/A 7.919±1.68 10.017±0.14 N/A 15.904±2.34 36.164±18.04 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TL CIL_0003TL_0002 CGP 9:54604877-54716315
CIL_0003TI CIL_0003TI_0002 CGP 9:54698873-54734519
CIL_00050O CIL_00050O_0003 CGP 9:54714735-54773110

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0016055 IEA Wnt signaling pathway
GO:0016593 ISS Cdc73/Paf1 complex
GO:0032968 ISS positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 ISS transcriptionally active chromatin
GO:0045638 ISS negative regulation of myeloid cell differentiation
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051571 ISS positive regulation of histone H3-K4 methylation
GO:0055087 ISS Ski complex
GO:0080182 ISS histone H3-K4 trimethylation
GO:2001162 ISS positive regulation of histone H3-K79 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007755 wdr61 WD repeat domain 61 protein_coding Danio_rerio
ENSG00000140395 WDR61 WD repeat domain 61 protein_coding Homo_sapiens

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