C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007755-ENSDARG00000045926 CGP 7955 25:6634147-6690536
GeneTranscriptPositionBiotype
ENSDARG00000045926 (crabp1a)
cellular retinoic acid binding protein 1a 		ENSDART00000067510 (crabp1a-001) 6660041-6690536 protein_coding
ENSDART00000142705 (crabp1a-002) 6660041-6690534 protein_coding
CIL_00050O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140395-ENSG00000166426 CGP 9606 15:78277835-78348230
GeneTranscriptPositionBiotype
ENSG00000140395 (WDR61)
WD repeat domain 61 		ENST00000267973 (WDR61-001) 78283235-78299794 protein_coding
ENST00000558311 (WDR61-006) 78283235-78299605 protein_coding
ENST00000558412 (WDR61-012) 78283235-78285900 retained_intron
ENST00000558453 (WDR61-014) 78277835-78289637 protein_coding
ENST00000558459 (WDR61-017) 78283256-78299591 protein_coding
ENST00000558840 (WDR61-007) 78292632-78299636 processed_transcript
ENST00000559332 (WDR61-011) 78283235-78286133 processed_transcript
ENST00000559700 (WDR61-003) 78292074-78299609 retained_intron
ENST00000559848 (WDR61-010) 78288339-78299597 nonsense_mediated_decay
ENST00000559940 (WDR61-005) 78283235-78286863 retained_intron
ENST00000560063 (WDR61-004) 78291762-78299607 retained_intron
ENST00000560569 (WDR61-016) 78283468-78299570 protein_coding
ENST00000560610 (WDR61-009) 78288289-78299601 nonsense_mediated_decay
ENST00000560807 (WDR61-013) 78277835-78290029 protein_coding
ENST00000560946 (WDR61-008) 78294475-78299614 retained_intron
ENST00000561347 (WDR61-002) 78294737-78299703 retained_intron
ENSG00000140403 (DNAJA4)
DnaJ (Hsp40) homolog, subfamily A, member 4 		ENST00000343789 (DNAJA4-003) 78264562-78282196 protein_coding
ENST00000394852 (DNAJA4-002) 78264574-78282192 protein_coding
ENST00000394855 (DNAJA4-001) 78264086-78282196 protein_coding
ENST00000423642 (DNAJA4-004) 78264562-78274266 nonsense_mediated_decay
ENST00000440911 (DNAJA4-012) 78264544-78280541 nonsense_mediated_decay
ENST00000446172 (DNAJA4-006) 78266181-78280684 protein_coding
ENST00000480425 (DNAJA4-010) 78279137-78282196 retained_intron
ENST00000483802 (DNAJA4-011) 78264562-78280668 nonsense_mediated_decay
ENST00000485075 (DNAJA4-008) 78270017-78275436 retained_intron
ENST00000489435 (DNAJA4-005) 78264145-78266039 protein_coding
ENST00000493321 (DNAJA4-009) 78274997-78280545 retained_intron
ENST00000542636 (DNAJA4-007) 78264609-78280059 nonsense_mediated_decay
ENSG00000166426 (CRABP1)
cellular retinoic acid binding protein 1 		ENST00000299529 (CRABP1-001) 78340324-78348230 protein_coding
ENST00000406419 (CRABP1-002) 78340476-78348078 nonsense_mediated_decay
ENST00000560753 (CRABP1-003) 78347821-78348221 retained_intron
ENSG00000259562 (RP11-762H8.2)
 ENST00000560331 (RP11-762H8.2-001) 78290527-78291221 transcribed_processed_pseudogene
ENSG00000272418 (RP11-762H8.4)
 ENST00000558192 (RP11-762H8.4-001) 78280950-78282190 sense_intronic
ENSG00000279694 (RP11-5O23.2)
 ENST00000624293 (RP11-5O23.2-001) 78339208-78341757 TEC
CIL_00050O_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061559-ENSMUSG00000032291 CGP 10090 9:54714735-54773110
GeneTranscriptPositionBiotype
ENSMUSG00000032285 (Dnaja4)
DnaJ (Hsp40) homolog, subfamily A, member 4 		ENSMUST00000070070 (Dnaja4-001) 54699559-54716315 protein_coding
ENSMUST00000120452 (Dnaja4-002) 54698873-54714761 protein_coding
ENSMUST00000154690 (Dnaja4-003) 54699514-54709336 protein_coding
ENSMUSG00000032291 (Crabp1)
cellular retinoic acid binding protein I 		ENSMUST00000034830 (Crabp1-001) 54764748-54773110 protein_coding
ENSMUSG00000061559 (Wdr61)
WD repeat domain 61 		ENSMUST00000051822 (Wdr61-001) 54717159-54734517 protein_coding
ENSMUST00000118771 (Wdr61-004) 54714735-54734482 protein_coding
ENSMUST00000121204 (Wdr61-002) 54717164-54734519 protein_coding
ENSMUST00000127451 (Wdr61-005) 54722874-54734502 protein_coding
ENSMUST00000130368 (Wdr61-003) 54717159-54734497 protein_coding
ENSMUST00000144365 (Wdr61-007) 54719220-54720814 retained_intron
ENSMUST00000148494 (Wdr61-006) 54722525-54724357 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050O_0001ENSDARG00000045926ENSDART00000067510ENSDART00000142705CIL_00050O_0002ENSG00000140395ENST00000267973ENST00000558311ENST00000558412ENST00000558453ENST00000558459ENST00000558840ENST00000559332ENST00000559700ENST00000559848ENST00000559940ENST00000560063ENST00000560569ENST00000560610ENST00000560807ENST00000560946ENST00000561347ENSG00000140403ENST00000343789ENST00000394852ENST00000394855ENST00000423642ENST00000440911ENST00000446172ENST00000480425ENST00000483802ENST00000485075ENST00000489435ENST00000493321ENST00000542636ENSG00000166426ENST00000299529ENST00000406419ENST00000560753ENSG00000259562ENST00000560331ENSG00000272418ENST00000558192ENSG00000279694ENST00000624293CIL_00050O_0003ENSMUSG00000032285ENSMUST00000070070ENSMUST00000120452ENSMUST00000154690ENSMUSG00000032291ENSMUST00000034830ENSMUSG00000061559ENSMUST00000051822ENSMUST00000118771ENSMUST00000121204ENSMUST00000127451ENSMUST00000130368ENSMUST00000144365ENSMUST00000148494
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050O_0001ENSDARG00000045926ENSDART00000067510CIL_00050O_0002ENSG00000140395ENST00000267973ENST00000558459ENST00000559700ENST00000559848ENST00000559940ENST00000560063ENST00000560569ENST00000560610ENST00000561347ENSG00000140403ENST00000343789ENST00000394852ENST00000394855ENST00000440911ENST00000446172ENST00000480425ENST00000483802ENST00000485075ENST00000493321ENSG00000166426ENST00000299529ENST00000406419ENST00000560753ENSG00000259562ENST00000560331ENSG00000272418ENST00000558192ENSG00000279694ENST00000624293CIL_00050O_0003ENSMUSG00000032285ENSMUST00000070070ENSMUST00000120452ENSMUST00000154690ENSMUSG00000032291ENSMUST00000034830ENSMUSG00000061559ENSMUST00000051822ENSMUST00000118771ENSMUST00000121204ENSMUST00000130368
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045926 ENSDART00000067510 N/A N/A N/A 118.409±92.81 N/A N/A 1.175±0.10 1.242±0.00 0.046±0.00 N/A 4.915±0.00 N/A N/A N/A
ENSDART00000142705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140395 ENST00000267973 3.543±0.00 5.698±0.00 N/A 6.414±4.73 6.381±4.14 2.882±0.34 6.051±0.00 11.068±0.00 2.931±0.00 3.052±0.00 N/A 12.180±8.06 13.256±6.63 10.879±0.00
ENST00000558311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558459 4.093±0.00 6.131±0.00 1.681±0.00 N/A N/A 2.832±0.00 N/A 6.102±0.00 3.749±0.00 3.315±0.00 1.530±0.81 6.006±3.18 N/A 5.884±0.00
ENST00000558840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559700 N/A N/A 1.524±0.00 N/A N/A N/A N/A N/A 2.555±0.00 1.848±0.00 0.683±0.00 N/A N/A N/A
ENST00000559848 N/A N/A 3.546±0.00 5.500±0.00 5.118±0.00 N/A N/A N/A N/A 4.062±0.00 0.932±0.00 1.814±0.00 N/A N/A
ENST00000559940 N/A N/A 0.359±0.00 0.682±0.00 N/A 0.568±0.00 N/A N/A 0.529±0.00 N/A 0.335±0.00 0.368±0.00 N/A N/A
ENST00000560063 N/A N/A N/A N/A N/A N/A N/A N/A 1.375±0.00 N/A N/A N/A N/A N/A
ENST00000560569 6.327±0.00 10.963±0.00 N/A 12.486±0.00 17.196±0.00 3.493±0.21 3.782±2.38 10.029±5.45 6.986±2.66 13.538±0.00 9.575±0.00 27.318±13.35 14.561±7.85 35.309±20.80
ENST00000560610 N/A N/A N/A N/A N/A N/A N/A 1.791±0.00 N/A N/A N/A N/A 8.679±0.00 24.587±0.00
ENST00000560807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561347 N/A N/A N/A 1.158±0.00 N/A N/A N/A 1.250±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000140403 ENST00000343789 N/A N/A N/A 4.731±0.00 1.751±0.00 N/A 1.216±0.00 N/A N/A N/A N/A 3.035±1.48 2.103±0.43 N/A
ENST00000394852 N/A N/A N/A 2.030±0.00 N/A N/A 1.425±0.00 N/A N/A N/A N/A 8.481±0.00 1.146±0.00 N/A
ENST00000394855 N/A N/A N/A N/A N/A 3.759±0.00 N/A N/A 1.861±0.00 N/A N/A 4.496±0.00 0.504±0.00 N/A
ENST00000423642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440911 3.144±0.00 3.552±0.00 N/A 22.175±0.00 N/A N/A N/A N/A 0.168±0.00 N/A N/A 8.780±0.00 N/A 41.990±7.41
ENST00000446172 N/A N/A 0.845±0.00 N/A N/A N/A 1.599±0.00 N/A 2.811±0.00 N/A N/A 2.345±0.00 N/A 30.143±0.00
ENST00000480425 N/A N/A 0.815±0.00 N/A 1.270±0.00 N/A N/A N/A N/A N/A N/A 2.150±0.00 N/A N/A
ENST00000483802 N/A N/A N/A N/A N/A 3.150±0.00 N/A N/A N/A N/A N/A 7.716±0.00 1.576±0.00 48.540±0.00
ENST00000485075 N/A N/A 0.430±0.00 2.133±0.00 2.514±0.00 N/A N/A 0.438±0.00 1.520±1.44 N/A N/A 1.624±0.00 1.335±0.63 N/A
ENST00000489435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493321 N/A N/A N/A N/A N/A N/A N/A 0.420±0.00 N/A N/A N/A N/A N/A N/A
ENST00000542636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166426 ENST00000299529 N/A 0.126±0.00 1.354±0.00 6.335±2.57 4.183±3.60 5.535±0.00 0.120±0.00 4.926±0.00 N/A N/A 0.136±0.00 5.857±7.21 11.531±5.04 0.912±0.45
ENST00000406419 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 0.219±0.00 0.336±0.00 N/A N/A
ENST00000560753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.065±0.00 N/A N/A
ENSG00000259562 ENST00000560331 0.180±0.00 1.079±0.00 1.200±0.00 0.316±0.08 1.054±0.64 0.392±0.29 0.273±0.00 0.673±0.02 0.441±0.16 0.555±0.32 0.917±0.00 1.267±0.71 0.436±0.30 2.005±1.68
ENSG00000272418 ENST00000558192 N/A N/A N/A N/A N/A N/A 79.460±0.00 19.639±0.00 N/A 32.193±0.00 9.966±0.00 N/A N/A N/A
ENSG00000279694 ENST00000624293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032285 ENSMUST00000070070 2.668±0.00 8.099±1.15 N/A 1.957±0.00 2.305±0.29 2.912±0.44 3.273±0.00 2.352±0.19 4.895±0.24 4.812±1.47 N/A 10.383±1.20 N/A 16.520±0.00
ENSMUST00000120452 N/A N/A N/A 8.566±0.00 N/A N/A 7.409±2.09 N/A 8.916±1.33 N/A 12.757±1.47 21.097±1.56 N/A 78.768±11.08
ENSMUST00000154690 N/A N/A N/A 28.214±0.00 N/A N/A N/A N/A N/A N/A N/A 71.803±0.00 N/A 353.506±0.00
ENSMUSG00000032291 ENSMUST00000034830 11.045±0.81 14.683±3.09 0.050±0.01 31.180±20.75 8.723±3.06 4.019±2.66 0.063±0.02 0.321±0.26 0.615±0.45 2.808±0.73 0.167±0.11 3.786±1.43 1.830±1.17 6.260±1.45
ENSMUSG00000061559 ENSMUST00000051822 14.670±1.95 4.968±0.00 44.581±7.37 19.897±3.48 7.514±2.36 9.020±3.54 N/A 15.326±2.69 26.414±12.12 11.451±0.72 N/A 23.253±6.71 59.325±26.89 N/A
ENSMUST00000118771 5.957±0.98 2.785±0.49 7.539±0.11 2.980±0.35 3.899±1.67 1.919±0.73 6.425±1.63 4.105±0.44 6.924±3.44 6.877±2.11 10.535±0.00 7.642±1.23 N/A 6.422±0.00
ENSMUST00000121204 N/A N/A 15.189±0.00 11.066±0.05 N/A 4.940±0.48 N/A 6.236±0.85 8.785±2.89 N/A N/A N/A 18.062±1.14 N/A
ENSMUST00000127451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130368 N/A 10.393±3.83 N/A 10.467±0.00 8.148±0.26 N/A N/A N/A 7.919±1.68 10.017±0.14 N/A 15.904±2.34 36.164±18.04 N/A
ENSMUST00000144365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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