C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TGFB-induced factor homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081335 Tgif2-001 ENSMUSG00000062175 10090 + 2:156840007-156855570 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000081335
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000081335 2.888±0.35 0.711±0.00 2.302±0.67 1.287±0.30 0.656±0.15 0.470±0.01 0.385±0.27 0.983±0.18 3.947±1.03 1.381±0.21 1.123±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RT CIL_0006RT_0003 CGP 2:156775420-156855570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0010470 IGI regulation of gastrulation
GO:0038092 IGI nodal signaling pathway
GO:0045666 IDA positive regulation of neuron differentiation
GO:0060041 IDA retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373872 TGIF2-001 protein_coding Homo_sapiens 0 1116
ENST00000373874 TGIF2-002 protein_coding Homo_sapiens 0 1003
ENST00000557885 TGIF2-006 protein_coding Homo_sapiens 0 329
ENST00000558028 TGIF2-004 protein_coding Homo_sapiens 0 675
ENST00000558465 TGIF2-007 protein_coding Homo_sapiens 0 191
ENST00000558530 TGIF2-C20orf24-001 protein_coding Homo_sapiens 0 270
ENST00000560025 TGIF2-003 protein_coding Homo_sapiens 0 894
ENST00000561398 TGIF2-005 protein_coding Homo_sapiens 0 204
ENST00000611732 TGIF2-201 protein_coding Homo_sapiens 0 1003

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