C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: G1 to S phase transition 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062203 Gspt1 10090 - 16:11219292-11254270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080030 Gspt1-002 11220052-11254209 protein_coding
  ENSMUST00000164098 Gspt1-004 11222585-11228517 retained_intron
  ENSMUST00000166063 Gspt1-003 11230912-11237820 retained_intron
  ENSMUST00000167025 Gspt1-005 11220401-11224498 protein_coding
  ENSMUST00000167571 Gspt1-001 11219292-11254270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080030ENSMUST00000164098ENSMUST00000166063ENSMUST00000167025ENSMUST00000167571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080030 2.770±0.56 52.479±20.67 9.620±2.36 7.255±2.20 5.907±3.25 N/A 1.289±0.00 2.065±0.00 9.232±5.46 N/A 5.528±1.05 32.556±13.07 42.578±17.01 28.703±0.00
ENSMUST00000164098 N/A N/A N/A N/A 3.466±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166063 N/A N/A N/A 59.348±0.00 N/A N/A N/A N/A N/A N/A N/A 183.279±0.00 217.407±80.41 95.140±0.00
ENSMUST00000167025 N/A N/A N/A N/A 9.179±0.00 N/A 6.818±0.64 N/A N/A N/A N/A N/A 26.636±0.00 6.603±0.00
ENSMUST00000167571 6.397±2.73 54.929±9.90 8.288±3.87 7.336±0.00 2.474±0.72 17.743±2.78 2.717±1.18 6.960±4.45 8.836±4.39 8.502±1.51 N/A 18.553±16.61 8.842±2.42 2.454±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KD CIL_0001KD_0002 CGP 16:11192970-11254270

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003747 ISS translation release factor activity
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0006415 IEA translational termination
GO:0006479 ISO protein methylation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014123 gspt1l G1 to S phase transition 1, like protein_coding Danio_rerio
ENSDARG00000031048 gspt1 G1 to S phase transition 1 protein_coding Danio_rerio
ENSG00000103342 GSPT1 G1 to S phase transition 1 protein_coding Homo_sapiens

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