C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal calcium sensor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062661 Ncs1 10090 + 2:31245823-31295989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000199 Ncs1-001 31245823-31295989 protein_coding
  ENSMUST00000150670 Ncs1-002 31246166-31292319 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000199ENSMUST00000150670
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000199 3.217±1.72 1.845±0.37 3.098±0.21 27.337±6.08 1.150±0.36 2.052±0.12 2.329±0.61 1.458±0.33 0.177±0.15 1.150±0.25 1.311±0.20 4.708±1.75 0.624±0.41 3.084±1.19
ENSMUST00000150670 N/A N/A N/A 142.163±0.00 N/A N/A N/A N/A 0.086±0.00 N/A N/A 7.066±0.00 3.201±0.00 7.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XI CIL_0004XI_0002 CGP 2:31152316-31295989
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0004XH CIL_0004XH_0002 CGP 2:31245823-31460738

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0005245 ISS voltage-gated calcium channel activity
GO:0005509 TAS calcium ion binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0010975 ISS regulation of neuron projection development
GO:0019901 IEA protein kinase binding
GO:0030054 IEA cell junction
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0031045 IEA dense core granule
GO:0031410 IEA cytoplasmic vesicle
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045211 IEA postsynaptic membrane
GO:0045921 IEA positive regulation of exocytosis
GO:0048015 IEA phosphatidylinositol-mediated signaling
GO:0050806 TAS positive regulation of synaptic transmission
GO:0070062 IEA extracellular vesicular exosome
GO:0070588 ISS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054186 ncs1b neuronal calcium sensor 1b protein_coding Danio_rerio
ENSDARG00000055229 ncs1a neuronal calcium sensor 1a protein_coding Danio_rerio
ENSG00000107130 NCS1 neuronal calcium sensor 1 protein_coding Homo_sapiens

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