C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004XI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148358-ENSG00000107130 CGP 9606 9:130053426-130237304
GeneTranscriptPositionBiotype
ENSG00000107130 (NCS1)
neuronal calcium sensor 1 		ENST00000372398 (NCS1-001) 130172578-130237304 protein_coding
ENST00000493042 (NCS1-002) 130193828-130217920 processed_transcript
ENSG00000148358 (GPR107)
G protein-coupled receptor 107 		ENST00000347136 (GPR107-005) 130053426-130140164 protein_coding
ENST00000372406 (GPR107-003) 130053426-130140164 protein_coding
ENST00000372410 (GPR107-201) 130053706-130140169 protein_coding
ENST00000415344 (GPR107-007) 130129591-130133236 processed_transcript
ENST00000462907 (GPR107-002) 130083302-130090906 processed_transcript
ENST00000483935 (GPR107-006) 130107519-130127531 processed_transcript
ENST00000493417 (GPR107-001) 130053921-130130024 nonsense_mediated_decay
ENST00000610997 (GPR107-202) 130053925-130136123 protein_coding
ENSG00000196979 (RP11-88G17.6)
 ENST00000358748 (RP11-88G17.6-001) 130140610-130144219 lincRNA
ENSG00000223188 (Y_RNA)
Y RNA 		ENST00000411256 (Y_RNA.1-827) 130120806-130120912 misc_RNA
CIL_0004XI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000194-ENSMUSG00000062661 CGP 10090 2:31152316-31295989
GeneTranscriptPositionBiotype
ENSMUSG00000000194 (Gpr107)
G protein-coupled receptor 107 		ENSMUST00000056433 (Gpr107-001) 31152316-31218775 protein_coding
ENSMUST00000127872 (Gpr107-010) 31185277-31209158 retained_intron
ENSMUST00000133207 (Gpr107-006) 31185607-31188750 processed_transcript
ENSMUST00000146747 (Gpr107-007) 31188769-31209340 retained_intron
ENSMUST00000147099 (Gpr107-009) 31206632-31210062 retained_intron
ENSMUST00000149622 (Gpr107-008) 31196896-31207707 processed_transcript
ENSMUST00000151991 (Gpr107-004) 31172267-31184851 processed_transcript
ENSMUST00000153032 (Gpr107-003) 31152333-31169156 retained_intron
ENSMUST00000164324 (Gpr107-011) 31218579-31219548 processed_transcript
ENSMUST00000169333 (Gpr107-005) 31210100-31214566 retained_intron
ENSMUST00000172422 (Gpr107-002) 31152351-31192113 retained_intron
ENSMUSG00000062661 (Ncs1)
neuronal calcium sensor 1 		ENSMUST00000000199 (Ncs1-001) 31245823-31295989 protein_coding
ENSMUST00000150670 (Ncs1-002) 31246166-31292319 processed_transcript
ENSMUSG00000088891 (Gm22516)
predicted gene, 22516 		ENSMUST00000158266 (Gm22516-201) 31189691-31189814 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XI_0001ENSG00000107130ENST00000372398ENST00000493042ENSG00000148358ENST00000347136ENST00000372406ENST00000372410ENST00000415344ENST00000462907ENST00000483935ENST00000493417ENST00000610997ENSG00000196979ENST00000358748ENSG00000223188ENST00000411256CIL_0004XI_0002ENSMUSG00000000194ENSMUST00000056433ENSMUST00000127872ENSMUST00000133207ENSMUST00000146747ENSMUST00000147099ENSMUST00000149622ENSMUST00000151991ENSMUST00000153032ENSMUST00000164324ENSMUST00000169333ENSMUST00000172422ENSMUSG00000062661ENSMUST00000000199ENSMUST00000150670ENSMUSG00000088891ENSMUST00000158266
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004XI_0001ENSG00000107130ENST00000372398ENSG00000148358ENST00000347136ENST00000372410ENST00000493417ENST00000610997ENSG00000196979ENST00000358748ENSG00000223188ENST00000411256CIL_0004XI_0002ENSMUSG00000000194ENSMUST00000056433ENSMUST00000169333ENSMUST00000172422ENSMUSG00000062661ENSMUST00000000199ENSMUST00000150670ENSMUSG00000088891ENSMUST00000158266
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107130 ENST00000372398 2.716±0.00 11.182±0.00 1.495±0.00 66.634±40.12 3.283±0.15 20.776±19.86 0.831±0.66 8.258±8.04 5.847±4.90 3.358±3.17 0.919±0.77 6.018±6.75 1.237±0.35 6.514±4.70
ENST00000493042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000148358 ENST00000347136 1.867±0.00 N/A 1.361±0.00 4.532±2.64 1.418±0.81 1.906±0.20 1.487±0.00 2.861±0.00 1.477±0.50 4.875±0.00 3.447±0.00 5.735±2.64 6.605±2.19 5.311±2.73
ENST00000372406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372410 9.414±0.00 4.785±0.00 1.744±0.00 8.635±0.00 5.090±3.13 4.805±1.71 2.808±2.47 2.187±0.07 2.741±0.53 3.985±1.20 2.583±1.17 4.478±3.52 6.485±0.38 8.126±1.75
ENST00000415344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462907 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493417 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.518±0.00 N/A N/A N/A N/A
ENST00000610997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.002±0.00 N/A N/A
ENSG00000196979 ENST00000358748 0.023±0.00 0.084±0.00 N/A 0.083±0.00 0.070±0.00 0.038±0.02 0.028±0.00 0.088±0.00 0.005±0.00 0.094±0.00 0.011±0.00 0.040±0.03 0.024±0.00 0.035±0.02
ENSG00000223188 ENST00000411256 0.211±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000194 ENSMUST00000056433 9.523±2.20 13.933±0.52 8.503±0.11 7.851±4.37 9.230±1.24 15.107±0.78 6.222±0.39 7.887±0.39 3.280±0.52 11.174±0.51 4.268±0.47 13.027±3.99 11.570±6.99 4.290±1.68
ENSMUST00000127872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.889±0.00 25.641±6.96 31.229±0.00
ENSMUST00000172422 8.573±0.29 N/A 5.834±0.67 6.520±0.99 8.954±0.82 N/A 3.509±0.34 6.023±1.34 3.010±0.91 7.585±0.00 3.239±0.47 5.982±0.00 16.769±9.46 13.056±5.90
ENSMUSG00000062661 ENSMUST00000000199 3.217±1.72 1.845±0.37 3.098±0.21 27.337±6.08 1.150±0.36 2.052±0.12 2.329±0.61 1.458±0.33 0.177±0.15 1.150±0.25 1.311±0.20 4.708±1.75 0.624±0.41 3.084±1.19
ENSMUST00000150670 N/A N/A N/A 142.163±0.00 N/A N/A N/A N/A 0.086±0.00 N/A N/A 7.066±0.00 3.201±0.00 7.015±0.00
ENSMUSG00000088891 ENSMUST00000158266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.309±0.00 N/A N/A

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