C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal transducer and activator of transcription 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000062939 Stat4 10090 + 1:51987148-52107189 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027277 Stat4-002 52008243-52107184 protein_coding
  ENSMUST00000168302 Stat4-001 51987148-52107189 protein_coding
  ENSMUST00000187053 Stat4-003 52008626-52072444 retained_intron
  ENSMUST00000187554 Stat4-005 52105449-52107188 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000027277ENSMUST00000168302
Transcript ID Testis
ENSMUST00000027277 44.410±7.87
ENSMUST00000168302 54.068±9.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0002 VISTA 1:51779533-52380137
CIL_0002AL CIL_0002AL_0002 CGP 1:51987148-52161865

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IDA protein phosphorylation
GO:0008283 IDA cell proliferation
GO:0019221 IDA cytokine-mediated signaling pathway
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0071310 IDA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028731 stat4 signal transducer and activator of transcription 4 protein_coding Danio_rerio
ENSG00000138378 STAT4 signal transducer and activator of transcription 4 protein_coding Homo_sapiens

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