C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027277 Stat4-002 ENSMUSG00000062939 10090 + 1:52008243-52107184 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000027277
Transcript ID Testis
ENSMUST00000027277 44.410±7.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0002 VISTA 1:51779533-52380137
CIL_0002AL CIL_0002AL_0002 CGP 1:51987148-52161865

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006468 IDA protein phosphorylation
GO:0008283 IDA cell proliferation
GO:0019221 IDA cytokine-mediated signaling pathway
GO:0043565 IDA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0071310 IDA cellular response to organic substance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358470 STAT4-001 protein_coding Homo_sapiens 0 2772
ENST00000392320 STAT4-002 protein_coding Homo_sapiens 0 2896
ENST00000409995 STAT4-007 protein_coding Homo_sapiens 0 348
ENST00000413064 STAT4-006 protein_coding Homo_sapiens 0 399
ENST00000432798 STAT4-005 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000450994 STAT4-004 protein_coding Homo_sapiens 0 313
ENST00000463951 STAT4-010 retained_intron Homo_sapiens 0 475
ENST00000495326 STAT4-008 retained_intron Homo_sapiens 0 503
ENST00000495849 STAT4-009 retained_intron Homo_sapiens 0 2486

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