C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon alpha 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063376 Ifna13 10090 - 4:88643641-88644459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000072734 Ifna13-201 88643641-88644459 protein_coding
  ENSMUST00000105149 Ifna13-001 88643641-88644459 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyPlacentaTestisENSMUST00000072734
Transcript ID Kidney Placenta Testis
ENSMUST00000072734 0.037±0.00 0.066±0.00 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056K CIL_00056K_000C CGP 4:88643641-88676924

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002250 IBA adaptive immune response
GO:0002286 IBA T cell activation involved in immune response
GO:0002323 IBA natural killer cell activation involved in immune response
GO:0005125 IBA cytokine activity
GO:0005132 IBA type I interferon receptor binding
GO:0005615 IBA extracellular space
GO:0006959 IBA humoral immune response
GO:0019221 IBA cytokine-mediated signaling pathway
GO:0030183 IBA B cell differentiation
GO:0033141 IBA positive regulation of peptidyl-serine phosphorylation of STAT protein
GO:0042100 IBA B cell proliferation
GO:0043330 IBA response to exogenous dsRNA
GO:0045087 IBA innate immune response
GO:0045343 IBA regulation of MHC class I biosynthetic process
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000120235 IFNA6 interferon, alpha 6 protein_coding Homo_sapiens
ENSG00000120242 IFNA8 interferon, alpha 8 protein_coding Homo_sapiens
ENSG00000137080 IFNA21 interferon, alpha 21 protein_coding Homo_sapiens
ENSG00000147873 IFNA5 interferon, alpha 5 protein_coding Homo_sapiens
ENSG00000147885 IFNA16 interferon, alpha 16 protein_coding Homo_sapiens
ENSG00000186803 IFNA10 interferon, alpha 10 protein_coding Homo_sapiens
ENSG00000188379 IFNA2 interferon, alpha 2 protein_coding Homo_sapiens
ENSG00000197919 IFNA1 interferon, alpha 1 protein_coding Homo_sapiens
ENSG00000214042 IFNA7 interferon, alpha 7 protein_coding Homo_sapiens
ENSG00000228083 IFNA14 interferon, alpha 14 protein_coding Homo_sapiens
ENSG00000233816 IFNA13 interferon, alpha 13 protein_coding Homo_sapiens
ENSG00000234829 IFNA17 interferon, alpha 17 protein_coding Homo_sapiens
ENSG00000236637 IFNA4 interferon, alpha 4 protein_coding Homo_sapiens

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