C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleoporin 98
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063550 Nup98 10090 - 7:102134204-102210120 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070165 Nup98-201 102134204-102210120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000070165
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000070165 4.445±1.29 5.786±0.86 2.921±1.43 2.353±1.55 1.836±0.43 2.787±2.21 1.333±0.88 8.366±0.00 0.567±0.00 5.330±2.14 2.662±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K0 CIL_0005K0_0002 CGP 7:102111266-102210120
CIL_0005K9 CIL_0005K9_0002 CGP 7:102134204-102238567

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000059 IEA protein import into nucleus, docking
GO:0000776 IEA kinetochore
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005635 IEA nuclear envelope
GO:0005654 IEA nucleoplasm
GO:0006260 IEA DNA replication
GO:0017056 IEA structural constituent of nuclear pore
GO:0031965 ISS nuclear membrane
GO:0034399 IEA nuclear periphery
GO:0042277 IEA peptide binding
GO:0042405 IEA nuclear inclusion body
GO:0044615 IEA nuclear pore nuclear basket
GO:0051028 IEA mRNA transport
GO:0051292 IEA nuclear pore complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074955 nup98 nucleoporin 98 protein_coding Danio_rerio
ENSG00000110713 NUP98 nucleoporin 98kDa protein_coding Homo_sapiens

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