C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome c, somatic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063694 Cycs 10090 - 6:50562563-50566538 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077766 Cycs-002 50565237-50565949 retained_intron
  ENSMUST00000161401 Cycs-001 50562563-50566538 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077766ENSMUST00000161401
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077766 N/A 1.662±0.66 N/A 33.655±0.00 N/A N/A N/A N/A 4.529±0.39 N/A N/A 7.150±7.86 42.826±36.04 6.521±4.63
ENSMUST00000161401 7.465±1.09 0.900±0.28 13.268±1.48 10.714±3.72 6.027±1.02 6.168±1.29 28.155±10.85 13.895±2.15 11.339±6.91 3.584±0.63 51.832±6.11 1.950±2.12 10.886±8.14 2.520±0.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CR CIL_0002CR_0002 CGP 6:50293330-50566538
CIL_00099B CIL_00099B_0002 VISTA 6:50510700-51111821
CIL_00094X CIL_00094X_0002 VISTA 6:50521119-51123589
CIL_0002CQ CIL_0002CQ_0002 CGP 6:50562563-50596632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002931 IEA response to ischemia
GO:0005506 IEA iron ion binding
GO:0005739 IEA mitochondrion
GO:0005829 IEA cytosol
GO:0006123 IEA mitochondrial electron transport, cytochrome c to oxygen
GO:0006915 IEA apoptotic process
GO:0006979 IEA response to oxidative stress
GO:0009055 IEA electron carrier activity
GO:0010730 IEA negative regulation of hydrogen peroxide biosynthetic process
GO:0020037 IEA heme binding
GO:0034349 IEA glial cell apoptotic process
GO:0055114 IEA oxidation-reduction process
GO:0070469 IEA respiratory chain
GO:1901857 IEA positive regulation of cellular respiration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000095636 cycsa cytochrome c, somatic a protein_coding Danio_rerio
ENSG00000172115 CYCS cytochrome c, somatic protein_coding Homo_sapiens

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