C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070882-ENSG00000172115 CGP 9606 7:24796539-25125361
GeneTranscriptPositionBiotype
ENSG00000070882 (OSBPL3)
oxysterol binding protein-like 3 		ENST00000313367 (OSBPL3-001) 24796539-24980188 protein_coding
ENST00000396429 (OSBPL3-003) 24800135-24892575 protein_coding
ENST00000396431 (OSBPL3-002) 24799925-24892612 protein_coding
ENST00000409069 (OSBPL3-006) 24800135-24892575 protein_coding
ENST00000409452 (OSBPL3-005) 24800005-24892575 nonsense_mediated_decay
ENST00000409555 (OSBPL3-008) 24800060-24892575 nonsense_mediated_decay
ENST00000409759 (OSBPL3-007) 24800022-24892575 nonsense_mediated_decay
ENST00000409863 (OSBPL3-004) 24799766-24892575 nonsense_mediated_decay
ENST00000415162 (OSBPL3-009) 24870775-24918093 protein_coding
ENST00000415952 (OSBPL3-015) 24871983-24981634 protein_coding
ENST00000441059 (OSBPL3-010) 24871742-24918080 protein_coding
ENST00000459987 (OSBPL3-011) 24806820-24810359 retained_intron
ENST00000461835 (OSBPL3-013) 24842376-24849336 retained_intron
ENST00000487020 (OSBPL3-014) 24800029-24815093 processed_transcript
ENSG00000172115 (CYCS)
cytochrome c, somatic 		ENST00000305786 (CYCS-001) 25120091-25125361 protein_coding
ENST00000409409 (CYCS-002) 25123307-25125249 protein_coding
ENST00000409764 (CYCS-003) 25123444-25125260 protein_coding
ENST00000413447 (CYCS-004) 25123716-25125260 protein_coding
ENSG00000234999 (SNRPCP19)
small nuclear ribonucleoprotein polypeptide C pseudogene 19 		ENST00000420809 (SNRPCP19-001) 24906135-24906594 processed_pseudogene
ENSG00000238976 (AC004016.1)
 ENST00000459086 (AC004016.1-201) 24900812-24900905 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002CR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029822-ENSMUSG00000063694 CGP 10090 6:50293330-50566538
GeneTranscriptPositionBiotype
ENSMUSG00000029822 (Osbpl3)
oxysterol binding protein-like 3 		ENSMUST00000071728 (Osbpl3-001) 50296799-50456170 protein_coding
ENSMUST00000090019 (Osbpl3-007) 50297065-50370215 protein_coding
ENSMUST00000114466 (Osbpl3-008) 50297065-50370215 protein_coding
ENSMUST00000114468 (Osbpl3-003) 50293330-50382837 protein_coding
ENSMUST00000133141 (Osbpl3-002) 50300214-50382837 retained_intron
ENSMUST00000136926 (Osbpl3-006) 50352820-50397152 processed_transcript
ENSMUST00000141466 (Osbpl3-004) 50295183-50300354 retained_intron
ENSMUST00000146341 (Osbpl3-009) 50348085-50456161 protein_coding
ENSMUST00000147621 (Osbpl3-010) 50327412-50456145 processed_transcript
ENSMUST00000154333 (Osbpl3-005) 50411569-50456201 processed_transcript
ENSMUSG00000063694 (Cycs)
cytochrome c, somatic 		ENSMUST00000077766 (Cycs-002) 50565237-50565949 retained_intron
ENSMUST00000161401 (Cycs-001) 50562563-50566538 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CR_0001ENSG00000070882ENST00000313367ENST00000396429ENST00000396431ENST00000409069ENST00000409452ENST00000409555ENST00000409759ENST00000409863ENST00000415162ENST00000415952ENST00000441059ENST00000459987ENST00000461835ENST00000487020ENSG00000172115ENST00000305786ENST00000409409ENST00000409764ENST00000413447ENSG00000234999ENST00000420809ENSG00000238976ENST00000459086CIL_0002CR_0002ENSMUSG00000029822ENSMUST00000071728ENSMUST00000090019ENSMUST00000114466ENSMUST00000114468ENSMUST00000133141ENSMUST00000136926ENSMUST00000141466ENSMUST00000146341ENSMUST00000147621ENSMUST00000154333ENSMUSG00000063694ENSMUST00000077766ENSMUST00000161401
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CR_0001ENSG00000070882ENST00000313367ENST00000396429ENST00000396431ENST00000409069ENST00000409452ENST00000409555ENST00000409863ENST00000415162ENST00000441059ENSG00000172115ENST00000305786ENST00000409409ENST00000409764ENST00000413447ENSG00000234999ENST00000420809ENSG00000238976ENST00000459086CIL_0002CR_0002ENSMUSG00000029822ENSMUST00000071728ENSMUST00000090019ENSMUST00000114466ENSMUST00000114468ENSMUST00000133141ENSMUST00000141466ENSMUST00000147621ENSMUST00000154333ENSMUSG00000063694ENSMUST00000077766ENSMUST00000161401
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070882 ENST00000313367 0.443±0.00 N/A N/A 0.758±0.59 0.477±0.25 0.266±0.02 0.229±0.00 2.638±2.49 N/A 1.143±0.15 0.710±0.31 2.236±0.42 0.731±0.00 1.138±0.00
ENST00000396429 N/A N/A 1.560±0.00 1.388±0.71 N/A 0.524±0.38 0.272±0.00 N/A 0.072±0.00 N/A N/A N/A N/A 0.412±0.00
ENST00000396431 N/A N/A N/A 1.135±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409069 N/A N/A N/A N/A N/A 0.658±0.00 0.234±0.00 0.251±0.00 0.760±0.00 2.142±0.00 1.759±0.00 4.699±1.73 1.289±0.00 1.407±0.00
ENST00000409452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.546±0.00 N/A N/A 0.542±0.00
ENST00000409555 N/A N/A N/A N/A 1.719±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409863 N/A N/A N/A N/A N/A 0.641±0.00 N/A N/A N/A 0.766±0.00 N/A 2.397±0.00 N/A N/A
ENST00000415162 N/A N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 N/A N/A N/A N/A N/A
ENST00000415952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441059 N/A N/A N/A N/A N/A N/A 1.486±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000459987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172115 ENST00000305786 5.582±0.00 7.757±0.00 4.233±0.00 19.799±11.50 9.426±3.66 10.045±6.46 18.407±1.42 6.375±1.95 5.537±3.51 3.249±0.23 7.320±3.49 8.836±3.35 3.007±1.39 4.449±0.00
ENST00000409409 13.504±0.00 15.891±0.00 7.431±0.00 16.207±0.00 16.532±3.63 44.264±0.00 32.541±0.00 7.271±0.00 10.156±0.00 3.493±0.00 17.680±0.00 16.939±5.47 7.898±0.00 N/A
ENST00000409764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.584±0.00 14.427±0.00 49.835±0.00
ENST00000413447 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.004±0.00 N/A N/A N/A N/A
ENSG00000234999 ENST00000420809 N/A 0.155±0.00 N/A N/A 0.040±0.00 0.329±0.00 N/A 0.423±0.00 N/A 0.118±0.00 N/A 0.082±0.00 N/A N/A
ENSG00000238976 ENST00000459086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029822 ENSMUST00000071728 1.902±1.53 3.030±0.37 9.977±2.40 0.606±0.18 1.237±0.35 3.059±0.90 1.676±0.04 4.044±0.35 0.340±0.08 1.594±0.71 0.168±0.11 1.642±0.54 4.314±1.14 0.151±0.06
ENSMUST00000090019 0.249±0.00 2.459±0.49 6.196±0.00 5.366±0.00 1.229±0.00 2.962±0.40 3.100±0.40 6.039±1.64 0.036±0.00 1.147±0.00 0.160±0.01 2.079±1.77 2.253±0.39 0.071±0.01
ENSMUST00000114466 0.316±0.00 3.634±1.12 N/A N/A N/A N/A N/A 3.582±0.00 0.118±0.06 N/A 0.232±0.14 1.608±0.60 3.348±0.00 0.137±0.06
ENSMUST00000114468 0.997±0.00 2.622±0.09 5.185±1.89 0.317±0.00 0.607±0.12 1.202±0.39 N/A 4.003±1.52 0.044±0.01 1.435±0.37 N/A 1.023±0.40 0.531±0.06 0.009±0.00
ENSMUST00000133141 N/A 1.550±0.00 N/A N/A 0.639±0.00 N/A N/A N/A 0.105±0.00 N/A 0.096±0.04 0.949±0.00 1.040±0.00 0.069±0.00
ENSMUST00000136926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141466 N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A 0.099±0.09 N/A 0.139±0.08 N/A N/A 0.038±0.00
ENSMUST00000146341 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147621 N/A 10.370±0.00 N/A N/A N/A 4.361±0.00 N/A N/A 0.176±0.00 N/A N/A 3.019±0.00 N/A N/A
ENSMUST00000154333 N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.06 N/A N/A 1.897±0.00 N/A 0.239±0.00
ENSMUSG00000063694 ENSMUST00000077766 N/A 1.662±0.66 N/A 33.655±0.00 N/A N/A N/A N/A 4.529±0.39 N/A N/A 7.150±7.86 42.826±36.04 6.521±4.63
ENSMUST00000161401 7.465±1.09 0.900±0.28 13.268±1.48 10.714±3.72 6.027±1.02 6.168±1.29 28.155±10.85 13.895±2.15 11.339±6.91 3.584±0.63 51.832±6.11 1.950±2.12 10.886±8.14 2.520±0.85

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