C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000066800 Rnasel 10090 + 1:153749426-153764221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086209 Rnasel-003 153749426-153762401 protein_coding
  ENSMUST00000182016 Rnasel-007 153755984-153760814 processed_transcript
  ENSMUST00000182131 Rnasel-005 153751968-153760814 retained_intron
  ENSMUST00000182538 Rnasel-002 153752852-153764221 protein_coding
  ENSMUST00000182722 Rnasel-006 153749504-153760830 protein_coding
  ENSMUST00000183241 Rnasel-004 153751952-153760898 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086209ENSMUST00000182131ENSMUST00000182538ENSMUST00000182722ENSMUST00000183241
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086209 N/A N/A N/A 0.392±0.00 N/A 0.339±0.00 N/A 4.389±0.04 N/A 0.065±0.00 4.660±2.54 0.702±0.32 0.238±0.07
ENSMUST00000182131 N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A 0.250±0.00 N/A
ENSMUST00000182538 N/A 0.935±0.32 4.072±1.17 8.069±7.45 1.574±0.64 N/A 0.762±0.00 3.031±2.51 0.972±0.00 0.174±0.12 2.532±1.85 0.712±0.32 0.223±0.17
ENSMUST00000182722 1.326±0.00 N/A 3.030±0.17 5.732±5.39 N/A 0.681±0.12 N/A N/A N/A N/A N/A 0.681±0.31 N/A
ENSMUST00000183241 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A 0.146±0.05 5.103±0.52 0.373±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y8 CIL_0007Y8_0002 VISTA 1:153733856-154334857

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004519 IEA endonuclease activity
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0006364 IEA rRNA processing
GO:0006397 IEA mRNA processing
GO:0006468 IEA protein phosphorylation
GO:0016363 IEA nuclear matrix
GO:0019843 IEA rRNA binding
GO:0045071 IEA negative regulation of viral genome replication
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0051607 IEA defense response to virus
GO:0090501 IEA RNA phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000135828 RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) protein_coding Homo_sapiens

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