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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086209 Rnasel-003 ENSMUSG00000066800 10090 + 1:153749426-153762401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleOvaryPlacentaTestisENSMUST00000086209
Transcript ID Brain Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000086209 0.392±0.00 0.339±0.00 4.389±0.04 0.065±0.00 4.660±2.54 0.702±0.32 0.238±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y8 CIL_0007Y8_0002 VISTA 1:153733856-154334857

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004519 IEA endonuclease activity
GO:0004672 IEA protein kinase activity
GO:0005524 IEA ATP binding
GO:0005739 IEA mitochondrion
GO:0006364 IEA rRNA processing
GO:0006397 IEA mRNA processing
GO:0006468 IEA protein phosphorylation
GO:0016363 IEA nuclear matrix
GO:0019843 IEA rRNA binding
GO:0045071 IEA negative regulation of viral genome replication
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0051607 IEA defense response to virus
GO:0090501 IEA RNA phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367559 RNASEL-001 protein_coding Homo_sapiens 0 974
ENST00000539397 RNASEL-201 protein_coding Homo_sapiens 0 894

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