C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007Y8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm153 VISTA 9606 1:181935567-182536621
GeneTranscriptPositionBiotype
ENSG00000179930 (ZNF648)
zinc finger protein 648 		ENST00000339948 (ZNF648-001) 182054570-182061712 protein_coding
ENSG00000203729 (LINC00272)
long intergenic non-protein coding RNA 272 		ENST00000367563 (LINC00272-001) 182407621-182414815 lincRNA
ENST00000612603 (LINC00272-201) 182407771-182409332 lincRNA
ENSG00000203730 (TEDDM1)
transmembrane epididymal protein 1 		ENST00000367565 (TEDDM1-001) 182398117-182400616 protein_coding
ENSG00000224810 (RP11-538D16.2)
 ENST00000411509 (RP11-538D16.2-001) 182062677-182069253 lincRNA
ENSG00000225982 (RP11-538D16.3)
 ENST00000428646 (RP11-538D16.3-001) 182086551-182090112 lincRNA
ENSG00000228664 (RP11-416K24.1)
 ENST00000451731 (RP11-416K24.1-001) 182328497-182329007 processed_pseudogene
ENSG00000228918 (LINC01344)
long intergenic non-protein coding RNA 1344 		ENST00000420760 (LINC01344-003) 182190120-182204025 lincRNA
ENST00000449842 (LINC01344-002) 182203945-182314061 lincRNA
ENST00000608183 (LINC01344-001) 182129310-182244399 lincRNA
ENSG00000231684 (EIF1P3)
eukaryotic translation initiation factor 1 pseudogene 3 		ENST00000423841 (EIF1P3-001) 182336001-182336334 processed_pseudogene
ENSG00000232096 (YPEL5P1)
yippee-like 5 (Drosophila) pseudogene 1 		ENST00000419731 (YPEL5P1-001) 182182730-182183096 processed_pseudogene
ENSG00000232309 (GS1-122H1.1)
 ENST00000412174 (GS1-122H1.1-001) 182127297-182128665 lincRNA
ENSG00000233537 (TEDDM2P)
transmembrane epididymal protein 2, pseudogene 		ENST00000414169 (TEDDM2P-001) 182441577-182442362 unitary_pseudogene
ENSG00000270443 (RP1-223H12.5)
 ENST00000605228 (RP1-223H12.5-001) 182433893-182434461 processed_pseudogene
CIL_0007Y8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm153 VISTA 10090 1:153733856-154334857
GeneTranscriptPositionBiotype
ENSMUSG00000026473 (Glul)
glutamate-ammonia ligase (glutamine synthetase) 		ENSMUST00000086199 (Glul-001) 153899944-153909723 protein_coding
ENSMUST00000139476 (Glul-005) 153900606-153907140 protein_coding
ENSMUST00000140685 (Glul-002) 153901116-153906356 protein_coding
ENSMUST00000153134 (Glul-003) 153903798-153907029 processed_transcript
ENSMUST00000154576 (Glul-004) 153906043-153907116 retained_intron
ENSMUSG00000026475 (Rgs16)
regulator of G-protein signaling 16 		ENSMUST00000027748 (Rgs16-001) 153740349-153745468 protein_coding
ENSMUSG00000042641 (Rgsl1)
regulator of G-protein signaling like 1 		ENSMUST00000124558 (Rgsl1-003) 153779386-153844142 protein_coding
ENSMUST00000134030 (Rgsl1-002) 153792954-153821512 retained_intron
ENSMUST00000141249 (Rgsl1-001) 153779381-153808164 protein_coding
ENSMUST00000145308 (Rgsl1-004) 153781688-153790770 processed_transcript
ENSMUST00000184095 (Rgsl1-006) 153802304-153825296 nonsense_mediated_decay
ENSMUST00000185164 (Rgsl1-005) 153785143-153844134 nonsense_mediated_decay
ENSMUSG00000043282 (Gm5531)
transmembrane epididymal protein 1B 		ENSMUST00000055314 (Gm5531-001) 153874345-153876871 protein_coding
ENSMUSG00000047053 (Teddm1)
transmembrane epididymal protein 1A 		ENSMUST00000050660 (Teddm1-001) 153891742-153893058 protein_coding
ENSMUSG00000066797 (Zfp648)
zinc finger protein 648 		ENSMUST00000086195 (Zfp648-001) 154201187-154205689 protein_coding
ENSMUSG00000066800 (Rnasel)
ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) 		ENSMUST00000086209 (Rnasel-003) 153749426-153762401 protein_coding
ENSMUST00000182016 (Rnasel-007) 153755984-153760814 processed_transcript
ENSMUST00000182131 (Rnasel-005) 153751968-153760814 retained_intron
ENSMUST00000182538 (Rnasel-002) 153752852-153764221 protein_coding
ENSMUST00000182722 (Rnasel-006) 153749504-153760830 protein_coding
ENSMUST00000183241 (Rnasel-004) 153751952-153760898 protein_coding
ENSMUSG00000088669 (Gm25336)
predicted gene, 25336 		ENSMUST00000158044 (Gm25336-201) 154080095-154080199 snoRNA
ENSMUSG00000099568 (RP23-184B11.6)
predicted gene 28513 		ENSMUST00000191474 (RP23-184B11.6-001) 153743552-153749324 antisense
ENSMUSG00000099933 (RP24-502N12.1)
RIKEN cDNA 4930452N14 gene 		ENSMUST00000189240 (RP24-502N12.1-001) 154241521-154256906 lincRNA
ENSMUSG00000100014 (RP23-218F13.5)
predicted gene 29290 		ENSMUST00000185385 (RP23-218F13.5-001) 153939226-153941290 lincRNA
ENSMUSG00000100183 (RP23-184B11.7)
predicted gene 28512 		ENSMUST00000187415 (RP23-184B11.7-001) 153750682-153751547 sense_intronic
ENSMUSG00000100221 (RP24-502N12.2)
RIKEN cDNA 4930532M18 gene 		ENSMUST00000187189 (RP24-502N12.2-001) 154255689-154270416 lincRNA
ENSMUST00000190980 (RP24-502N12.2-002) 154257003-154270237 lincRNA
ENSMUSG00000100334 (RP23-184B11.4)
RIKEN cDNA C230024C17 gene 		ENSMUST00000190663 (RP23-184B11.4-001) 153721240-153737829 lincRNA
ENSMUSG00000100502 (RP23-218F13.6)
predicted gene 28286 		ENSMUST00000188704 (RP23-218F13.6-001) 154027363-154034301 lincRNA
ENSMUSG00000100627 (RP24-255G23.1)
RIKEN cDNA A830008E24 gene 		ENSMUST00000185465 (RP24-255G23.1-001) 154037597-154116153 lincRNA
ENSMUST00000190485 (RP24-255G23.1-002) 154048109-154117951 lincRNA
ENSMUSG00000101903 (RP23-218F13.7)
predicted gene 29291 		ENSMUST00000186055 (RP23-218F13.7-001) 154003552-154006221 lincRNA
ENSMUST00000188927 (RP23-218F13.7-002) 154003396-154006217 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y8_0001ENSG00000179930ENST00000339948ENSG00000203729ENST00000367563ENST00000612603ENSG00000203730ENST00000367565ENSG00000224810ENST00000411509ENSG00000225982ENST00000428646ENSG00000228664ENST00000451731ENSG00000228918ENST00000420760ENST00000449842ENST00000608183ENSG00000231684ENST00000423841ENSG00000232096ENST00000419731ENSG00000232309ENST00000412174ENSG00000233537ENST00000414169ENSG00000270443ENST00000605228CIL_0007Y8_0002ENSMUSG00000026473ENSMUST00000086199ENSMUST00000139476ENSMUST00000140685ENSMUST00000153134ENSMUST00000154576ENSMUSG00000026475ENSMUST00000027748ENSMUSG00000042641ENSMUST00000124558ENSMUST00000134030ENSMUST00000141249ENSMUST00000145308ENSMUST00000184095ENSMUST00000185164ENSMUSG00000043282ENSMUST00000055314ENSMUSG00000047053ENSMUST00000050660ENSMUSG00000066797ENSMUST00000086195ENSMUSG00000066800ENSMUST00000086209ENSMUST00000182016ENSMUST00000182131ENSMUST00000182538ENSMUST00000182722ENSMUST00000183241ENSMUSG00000088669ENSMUST00000158044ENSMUSG00000099568ENSMUST00000191474ENSMUSG00000099933ENSMUST00000189240ENSMUSG00000100014ENSMUST00000185385ENSMUSG00000100183ENSMUST00000187415ENSMUSG00000100221ENSMUST00000187189ENSMUST00000190980ENSMUSG00000100334ENSMUST00000190663ENSMUSG00000100502ENSMUST00000188704ENSMUSG00000100627ENSMUST00000185465ENSMUST00000190485ENSMUSG00000101903ENSMUST00000186055ENSMUST00000188927
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y8_0001ENSG00000179930ENST00000339948ENSG00000203729ENST00000367563ENST00000612603ENSG00000203730ENST00000367565ENSG00000224810ENST00000411509ENSG00000225982ENST00000428646ENSG00000228664ENST00000451731ENSG00000228918ENST00000420760ENST00000449842ENST00000608183ENSG00000231684ENST00000423841ENSG00000232096ENST00000419731ENSG00000232309ENST00000412174ENSG00000233537ENST00000414169ENSG00000270443ENST00000605228CIL_0007Y8_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179930 ENST00000339948 N/A 0.018±0.00 0.031±0.00 0.010±0.00 0.046±0.04 N/A N/A 0.300±0.00 0.012±0.00 0.008±0.00 N/A 0.096±0.02 0.011±0.00 0.242±0.03
ENSG00000203729 ENST00000367563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A 0.456±0.00
ENST00000612603 N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00
ENSG00000203730 ENST00000367565 0.032±0.00 0.110±0.00 0.128±0.00 0.069±0.02 0.134±0.00 0.065±0.03 0.019±0.00 0.087±0.00 0.102±0.10 0.122±0.11 0.004±0.00 0.101±0.08 0.042±0.02 7.074±5.63
ENSG00000224810 ENST00000411509 0.410±0.00 0.687±0.00 N/A 1.335±0.00 0.277±0.17 0.318±0.00 0.577±0.00 0.276±0.26 0.258±0.00 0.294±0.00 0.037±0.00 0.116±0.07 0.015±0.00 0.433±0.18
ENSG00000225982 ENST00000428646 N/A N/A N/A 0.036±0.00 N/A 0.085±0.05 0.091±0.08 0.061±0.00 N/A N/A N/A N/A 0.064±0.02 0.095±0.05
ENSG00000228664 ENST00000451731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.436±0.00
ENSG00000228918 ENST00000420760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.399±0.00
ENST00000449842 N/A N/A N/A 0.064±0.00 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.31
ENST00000608183 0.026±0.00 0.173±0.00 N/A 0.023±0.00 0.082±0.04 0.018±0.00 0.034±0.00 0.148±0.09 0.005±0.00 0.027±0.01 N/A N/A N/A 0.159±0.08
ENSG00000231684 ENST00000423841 0.037±0.00 0.037±0.00 N/A 0.112±0.00 0.036±0.00 0.102±0.00 0.067±0.00 0.073±0.00 N/A N/A 0.289±0.00 0.126±0.00 N/A 0.114±0.01
ENSG00000232096 ENST00000419731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00
ENSG00000232309 ENST00000412174 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A 0.290±0.00
ENSG00000233537 ENST00000414169 N/A N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A
ENSG00000270443 ENST00000605228 N/A 0.576±0.00 N/A 0.329±0.00 1.031±0.00 0.148±0.00 0.150±0.00 N/A 0.144±0.00 0.152±0.00 0.147±0.00 N/A N/A 0.214±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026473 ENSMUST00000086199 375.571±87.00 330.587±47.24 98.036±12.17 61.640±25.35 539.331±131.41 179.906±27.23 92.872±17.54 343.117±30.33 275.161±213.99 129.711±28.07 85.607±32.68 169.441±39.61 49.997±29.61 98.015±8.62
ENSMUST00000139476 N/A N/A N/A 471.791±0.00 470.774±0.00 N/A N/A N/A N/A N/A N/A 211.679±0.00 70.562±5.96 361.281±0.00
ENSMUST00000140685 N/A N/A N/A N/A 618.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026475 ENSMUST00000027748 1.483±0.76 0.386±0.09 1.104±0.07 9.879±3.62 1.845±0.28 1.323±0.29 0.352±0.10 0.235±0.03 4.096±5.67 0.370±0.03 0.238±0.09 1.297±0.34 5.268±2.90 0.428±0.07
ENSMUSG00000042641 ENSMUST00000124558 0.026±0.00 N/A N/A N/A N/A N/A 0.014±0.00 0.053±0.00 0.017±0.00 N/A 0.052±0.04 0.113±0.05 0.012±0.00 1.271±0.00
ENSMUST00000134030 0.153±0.06 0.043±0.00 N/A 0.025±0.00 0.087±0.05 0.052±0.02 N/A N/A 0.019±0.01 0.059±0.02 N/A 0.109±0.00 0.030±0.02 N/A
ENSMUST00000141249 0.135±0.00 N/A 0.064±0.00 0.099±0.04 0.108±0.03 N/A 0.048±0.03 0.029±0.00 0.011±0.01 0.073±0.00 0.043±0.01 0.082±0.01 0.044±0.04 4.793±0.76
ENSMUST00000145308 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 0.336±0.00 N/A N/A N/A N/A
ENSMUST00000184095 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A 0.048±0.02 N/A 0.014±0.00 N/A
ENSMUST00000185164 0.077±0.00 0.060±0.04 N/A N/A N/A 0.039±0.01 0.015±0.01 0.017±0.01 0.005±0.00 0.028±0.00 N/A 0.116±0.07 N/A 1.101±0.00
ENSMUSG00000043282 ENSMUST00000055314 0.120±0.08 0.068±0.02 0.031±0.00 0.060±0.01 0.094±0.01 0.068±0.04 0.013±0.00 0.019±0.01 0.060±0.04 0.055±0.00 0.025±0.02 0.108±0.06 0.052±0.04 0.054±0.02
ENSMUSG00000047053 ENSMUST00000050660 0.394±0.19 N/A 0.026±0.01 0.024±0.01 0.063±0.04 0.055±0.00 0.029±0.01 0.049±0.00 0.029±0.02 0.098±0.07 0.112±0.08 0.165±0.07 0.026±0.02 0.109±0.09
ENSMUSG00000066797 ENSMUST00000086195 0.027±0.01 0.424±0.04 N/A 0.198±0.16 N/A 0.129±0.05 0.017±0.00 0.497±0.15 0.010±0.01 0.030±0.02 N/A 0.268±0.13 0.011±0.00 0.158±0.13
ENSMUSG00000066800 ENSMUST00000086209 N/A N/A N/A 0.392±0.00 N/A N/A 0.339±0.00 N/A 4.389±0.04 N/A 0.065±0.00 4.660±2.54 0.702±0.32 0.238±0.07
ENSMUST00000182016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182131 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A 0.250±0.00 N/A
ENSMUST00000182538 N/A 0.935±0.32 4.072±1.17 8.069±7.45 1.574±0.64 N/A N/A 0.762±0.00 3.031±2.51 0.972±0.00 0.174±0.12 2.532±1.85 0.712±0.32 0.223±0.17
ENSMUST00000182722 1.326±0.00 N/A 3.030±0.17 5.732±5.39 N/A N/A 0.681±0.12 N/A N/A N/A N/A N/A 0.681±0.31 N/A
ENSMUST00000183241 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A 0.146±0.05 5.103±0.52 0.373±0.00 N/A
ENSMUSG00000088669 ENSMUST00000158044 N/A N/A N/A N/A 2020.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099568 ENSMUST00000191474 0.726±0.05 0.647±0.30 N/A 7.219±0.00 1.436±0.00 1.188±0.41 0.352±0.00 N/A 1.337±0.65 0.527±0.00 0.168±0.08 1.127±0.22 5.375±3.52 N/A
ENSMUSG00000099933 ENSMUST00000189240 N/A N/A N/A 0.055±0.04 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.14
ENSMUSG00000100014 ENSMUST00000185385 N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100183 ENSMUST00000187415 1.466±0.00 1.450±0.59 0.518±0.01 1.197±0.00 1.705±0.00 N/A 1.035±0.27 1.073±0.14 0.954±0.69 N/A 0.141±0.06 4.257±1.22 0.750±0.69 1.687±0.48
ENSMUSG00000100221 ENSMUST00000187189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.678±0.91
ENSMUST00000190980 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.115±0.00 3.479±0.75
ENSMUSG00000100334 ENSMUST00000190663 N/A 0.026±0.00 0.002±0.00 0.035±0.02 0.031±0.02 0.025±0.00 N/A N/A 0.002±0.00 N/A 0.010±0.00 0.028±0.02 0.011±0.01 0.022±0.00
ENSMUSG00000100502 ENSMUST00000188704 0.161±0.06 0.249±0.03 N/A N/A 1.889±0.69 N/A 0.072±0.00 0.157±0.06 0.049±0.00 0.158±0.00 0.133±0.05 0.303±0.15 0.074±0.01 0.514±0.27
ENSMUSG00000100627 ENSMUST00000185465 1.049±0.00 N/A N/A 0.138±0.00 22.319±2.16 0.275±0.00 N/A N/A N/A 0.168±0.03 0.070±0.02 1.742±1.60 0.273±0.23 0.207±0.17
ENSMUST00000190485 0.060±0.01 0.027±0.01 N/A 0.028±0.01 N/A 0.020±0.00 0.018±0.00 0.085±0.01 0.017±0.01 0.010±0.00 0.011±0.01 0.045±0.01 0.030±0.01 0.062±0.04
ENSMUSG00000101903 ENSMUST00000186055 0.119±0.00 N/A 0.146±0.00 0.438±0.00 0.157±0.04 N/A N/A N/A 0.062±0.02 N/A N/A 0.355±0.08 0.241±0.00 0.084±0.04
ENSMUST00000188927 0.074±0.00 N/A 0.448±0.03 N/A 0.382±0.21 N/A N/A 0.153±0.00 0.049±0.03 0.126±0.00 0.053±0.01 0.260±0.19 0.129±0.13 0.122±0.04

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