C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007Y8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm153 VISTA 9606 1:181935567-182536621
GeneTranscriptPositionBiotype
ENSG00000179930 (ZNF648)
zinc finger protein 648 		ENST00000339948 (ZNF648-001) 182054570-182061712 protein_coding
ENSG00000203729 (LINC00272)
long intergenic non-protein coding RNA 272 		ENST00000367563 (LINC00272-001) 182407621-182414815 lincRNA
ENST00000612603 (LINC00272-201) 182407771-182409332 lincRNA
ENSG00000203730 (TEDDM1)
transmembrane epididymal protein 1 		ENST00000367565 (TEDDM1-001) 182398117-182400616 protein_coding
ENSG00000224810 (RP11-538D16.2)
 ENST00000411509 (RP11-538D16.2-001) 182062677-182069253 lincRNA
ENSG00000225982 (RP11-538D16.3)
 ENST00000428646 (RP11-538D16.3-001) 182086551-182090112 lincRNA
ENSG00000228664 (RP11-416K24.1)
 ENST00000451731 (RP11-416K24.1-001) 182328497-182329007 processed_pseudogene
ENSG00000228918 (LINC01344)
long intergenic non-protein coding RNA 1344 		ENST00000420760 (LINC01344-003) 182190120-182204025 lincRNA
ENST00000449842 (LINC01344-002) 182203945-182314061 lincRNA
ENST00000608183 (LINC01344-001) 182129310-182244399 lincRNA
ENSG00000231684 (EIF1P3)
eukaryotic translation initiation factor 1 pseudogene 3 		ENST00000423841 (EIF1P3-001) 182336001-182336334 processed_pseudogene
ENSG00000232096 (YPEL5P1)
yippee-like 5 (Drosophila) pseudogene 1 		ENST00000419731 (YPEL5P1-001) 182182730-182183096 processed_pseudogene
ENSG00000232309 (GS1-122H1.1)
 ENST00000412174 (GS1-122H1.1-001) 182127297-182128665 lincRNA
ENSG00000233537 (TEDDM2P)
transmembrane epididymal protein 2, pseudogene 		ENST00000414169 (TEDDM2P-001) 182441577-182442362 unitary_pseudogene
ENSG00000270443 (RP1-223H12.5)
 ENST00000605228 (RP1-223H12.5-001) 182433893-182434461 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007Y8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm153 VISTA 10090 1:153733856-154334857
GeneTranscriptPositionBiotype
ENSMUSG00000026473 (Glul)
glutamate-ammonia ligase (glutamine synthetase) 		ENSMUST00000086199 (Glul-001) 153899944-153909723 protein_coding
ENSMUST00000139476 (Glul-005) 153900606-153907140 protein_coding
ENSMUST00000140685 (Glul-002) 153901116-153906356 protein_coding
ENSMUST00000153134 (Glul-003) 153903798-153907029 processed_transcript
ENSMUST00000154576 (Glul-004) 153906043-153907116 retained_intron
ENSMUSG00000026475 (Rgs16)
regulator of G-protein signaling 16 		ENSMUST00000027748 (Rgs16-001) 153740349-153745468 protein_coding
ENSMUSG00000042641 (Rgsl1)
regulator of G-protein signaling like 1 		ENSMUST00000124558 (Rgsl1-003) 153779386-153844142 protein_coding
ENSMUST00000134030 (Rgsl1-002) 153792954-153821512 retained_intron
ENSMUST00000141249 (Rgsl1-001) 153779381-153808164 protein_coding
ENSMUST00000145308 (Rgsl1-004) 153781688-153790770 processed_transcript
ENSMUST00000184095 (Rgsl1-006) 153802304-153825296 nonsense_mediated_decay
ENSMUST00000185164 (Rgsl1-005) 153785143-153844134 nonsense_mediated_decay
ENSMUSG00000043282 (Gm5531)
transmembrane epididymal protein 1B 		ENSMUST00000055314 (Gm5531-001) 153874345-153876871 protein_coding
ENSMUSG00000047053 (Teddm1)
transmembrane epididymal protein 1A 		ENSMUST00000050660 (Teddm1-001) 153891742-153893058 protein_coding
ENSMUSG00000066797 (Zfp648)
zinc finger protein 648 		ENSMUST00000086195 (Zfp648-001) 154201187-154205689 protein_coding
ENSMUSG00000066800 (Rnasel)
ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) 		ENSMUST00000086209 (Rnasel-003) 153749426-153762401 protein_coding
ENSMUST00000182016 (Rnasel-007) 153755984-153760814 processed_transcript
ENSMUST00000182131 (Rnasel-005) 153751968-153760814 retained_intron
ENSMUST00000182538 (Rnasel-002) 153752852-153764221 protein_coding
ENSMUST00000182722 (Rnasel-006) 153749504-153760830 protein_coding
ENSMUST00000183241 (Rnasel-004) 153751952-153760898 protein_coding
ENSMUSG00000088669 (Gm25336)
predicted gene, 25336 		ENSMUST00000158044 (Gm25336-201) 154080095-154080199 snoRNA
ENSMUSG00000099568 (RP23-184B11.6)
predicted gene 28513 		ENSMUST00000191474 (RP23-184B11.6-001) 153743552-153749324 antisense
ENSMUSG00000099933 (RP24-502N12.1)
RIKEN cDNA 4930452N14 gene 		ENSMUST00000189240 (RP24-502N12.1-001) 154241521-154256906 lincRNA
ENSMUSG00000100014 (RP23-218F13.5)
predicted gene 29290 		ENSMUST00000185385 (RP23-218F13.5-001) 153939226-153941290 lincRNA
ENSMUSG00000100183 (RP23-184B11.7)
predicted gene 28512 		ENSMUST00000187415 (RP23-184B11.7-001) 153750682-153751547 sense_intronic
ENSMUSG00000100221 (RP24-502N12.2)
RIKEN cDNA 4930532M18 gene 		ENSMUST00000187189 (RP24-502N12.2-001) 154255689-154270416 lincRNA
ENSMUST00000190980 (RP24-502N12.2-002) 154257003-154270237 lincRNA
ENSMUSG00000100334 (RP23-184B11.4)
RIKEN cDNA C230024C17 gene 		ENSMUST00000190663 (RP23-184B11.4-001) 153721240-153737829 lincRNA
ENSMUSG00000100502 (RP23-218F13.6)
predicted gene 28286 		ENSMUST00000188704 (RP23-218F13.6-001) 154027363-154034301 lincRNA
ENSMUSG00000100627 (RP24-255G23.1)
RIKEN cDNA A830008E24 gene 		ENSMUST00000185465 (RP24-255G23.1-001) 154037597-154116153 lincRNA
ENSMUST00000190485 (RP24-255G23.1-002) 154048109-154117951 lincRNA
ENSMUSG00000101903 (RP23-218F13.7)
predicted gene 29291 		ENSMUST00000186055 (RP23-218F13.7-001) 154003552-154006221 lincRNA
ENSMUST00000188927 (RP23-218F13.7-002) 154003396-154006217 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y8_0001ENSG00000179930ENST00000339948ENSG00000203729ENST00000367563ENST00000612603ENSG00000203730ENST00000367565ENSG00000224810ENST00000411509ENSG00000225982ENST00000428646ENSG00000228664ENST00000451731ENSG00000228918ENST00000420760ENST00000449842ENST00000608183ENSG00000231684ENST00000423841ENSG00000232096ENST00000419731ENSG00000232309ENST00000412174ENSG00000233537ENST00000414169ENSG00000270443ENST00000605228CIL_0007Y8_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Y8_0001ENSG00000179930ENST00000339948ENSG00000203729ENST00000367563ENST00000612603ENSG00000203730ENST00000367565ENSG00000224810ENST00000411509ENSG00000225982ENST00000428646ENSG00000228664ENST00000451731ENSG00000228918ENST00000420760ENST00000449842ENST00000608183ENSG00000231684ENST00000423841ENSG00000232096ENST00000419731ENSG00000232309ENST00000412174ENSG00000233537ENST00000414169ENSG00000270443ENST00000605228CIL_0007Y8_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179930 ENST00000339948 N/A 0.018±0.00 0.031±0.00 0.010±0.00 0.046±0.04 N/A N/A 0.300±0.00 0.012±0.00 0.008±0.00 N/A 0.096±0.02 0.011±0.00 0.242±0.03
ENSG00000203729 ENST00000367563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A 0.456±0.00
ENST00000612603 N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00
ENSG00000203730 ENST00000367565 0.032±0.00 0.110±0.00 0.128±0.00 0.069±0.02 0.134±0.00 0.065±0.03 0.019±0.00 0.087±0.00 0.102±0.10 0.122±0.11 0.004±0.00 0.101±0.08 0.042±0.02 7.074±5.63
ENSG00000224810 ENST00000411509 0.410±0.00 0.687±0.00 N/A 1.335±0.00 0.277±0.17 0.318±0.00 0.577±0.00 0.276±0.26 0.258±0.00 0.294±0.00 0.037±0.00 0.116±0.07 0.015±0.00 0.433±0.18
ENSG00000225982 ENST00000428646 N/A N/A N/A 0.036±0.00 N/A 0.085±0.05 0.091±0.08 0.061±0.00 N/A N/A N/A N/A 0.064±0.02 0.095±0.05
ENSG00000228664 ENST00000451731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.436±0.00
ENSG00000228918 ENST00000420760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.399±0.00
ENST00000449842 N/A N/A N/A 0.064±0.00 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.479±0.31
ENST00000608183 0.026±0.00 0.173±0.00 N/A 0.023±0.00 0.082±0.04 0.018±0.00 0.034±0.00 0.148±0.09 0.005±0.00 0.027±0.01 N/A N/A N/A 0.159±0.08
ENSG00000231684 ENST00000423841 0.037±0.00 0.037±0.00 N/A 0.112±0.00 0.036±0.00 0.102±0.00 0.067±0.00 0.073±0.00 N/A N/A 0.289±0.00 0.126±0.00 N/A 0.114±0.01
ENSG00000232096 ENST00000419731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00
ENSG00000232309 ENST00000412174 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A 0.290±0.00
ENSG00000233537 ENST00000414169 N/A N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A
ENSG00000270443 ENST00000605228 N/A 0.576±0.00 N/A 0.329±0.00 1.031±0.00 0.148±0.00 0.150±0.00 N/A 0.144±0.00 0.152±0.00 0.147±0.00 N/A N/A 0.214±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026473 ENSMUST00000086199 375.571±87.00 330.587±47.24 98.036±12.17 61.640±25.35 539.331±131.41 179.906±27.23 92.872±17.54 343.117±30.33 275.161±213.99 129.711±28.07 85.607±32.68 169.441±39.61 49.997±29.61 98.015±8.62
ENSMUST00000139476 N/A N/A N/A 471.791±0.00 470.774±0.00 N/A N/A N/A N/A N/A N/A 211.679±0.00 70.562±5.96 361.281±0.00
ENSMUST00000140685 N/A N/A N/A N/A 618.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026475 ENSMUST00000027748 1.483±0.76 0.386±0.09 1.104±0.07 9.879±3.62 1.845±0.28 1.323±0.29 0.352±0.10 0.235±0.03 4.096±5.67 0.370±0.03 0.238±0.09 1.297±0.34 5.268±2.90 0.428±0.07
ENSMUSG00000042641 ENSMUST00000124558 0.026±0.00 N/A N/A N/A N/A N/A 0.014±0.00 0.053±0.00 0.017±0.00 N/A 0.052±0.04 0.113±0.05 0.012±0.00 1.271±0.00
ENSMUST00000134030 0.153±0.06 0.043±0.00 N/A 0.025±0.00 0.087±0.05 0.052±0.02 N/A N/A 0.019±0.01 0.059±0.02 N/A 0.109±0.00 0.030±0.02 N/A
ENSMUST00000141249 0.135±0.00 N/A 0.064±0.00 0.099±0.04 0.108±0.03 N/A 0.048±0.03 0.029±0.00 0.011±0.01 0.073±0.00 0.043±0.01 0.082±0.01 0.044±0.04 4.793±0.76
ENSMUST00000145308 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 0.336±0.00 N/A N/A N/A N/A
ENSMUST00000184095 N/A N/A N/A N/A N/A N/A N/A N/A 0.006±0.00 N/A 0.048±0.02 N/A 0.014±0.00 N/A
ENSMUST00000185164 0.077±0.00 0.060±0.04 N/A N/A N/A 0.039±0.01 0.015±0.01 0.017±0.01 0.005±0.00 0.028±0.00 N/A 0.116±0.07 N/A 1.101±0.00
ENSMUSG00000043282 ENSMUST00000055314 0.120±0.08 0.068±0.02 0.031±0.00 0.060±0.01 0.094±0.01 0.068±0.04 0.013±0.00 0.019±0.01 0.060±0.04 0.055±0.00 0.025±0.02 0.108±0.06 0.052±0.04 0.054±0.02
ENSMUSG00000047053 ENSMUST00000050660 0.394±0.19 N/A 0.026±0.01 0.024±0.01 0.063±0.04 0.055±0.00 0.029±0.01 0.049±0.00 0.029±0.02 0.098±0.07 0.112±0.08 0.165±0.07 0.026±0.02 0.109±0.09
ENSMUSG00000066797 ENSMUST00000086195 0.027±0.01 0.424±0.04 N/A 0.198±0.16 N/A 0.129±0.05 0.017±0.00 0.497±0.15 0.010±0.01 0.030±0.02 N/A 0.268±0.13 0.011±0.00 0.158±0.13
ENSMUSG00000066800 ENSMUST00000086209 N/A N/A N/A 0.392±0.00 N/A N/A 0.339±0.00 N/A 4.389±0.04 N/A 0.065±0.00 4.660±2.54 0.702±0.32 0.238±0.07
ENSMUST00000182016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182131 N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A 0.250±0.00 N/A
ENSMUST00000182538 N/A 0.935±0.32 4.072±1.17 8.069±7.45 1.574±0.64 N/A N/A 0.762±0.00 3.031±2.51 0.972±0.00 0.174±0.12 2.532±1.85 0.712±0.32 0.223±0.17
ENSMUST00000182722 1.326±0.00 N/A 3.030±0.17 5.732±5.39 N/A N/A 0.681±0.12 N/A N/A N/A N/A N/A 0.681±0.31 N/A
ENSMUST00000183241 N/A N/A N/A 0.284±0.00 N/A N/A N/A N/A N/A N/A 0.146±0.05 5.103±0.52 0.373±0.00 N/A
ENSMUSG00000088669 ENSMUST00000158044 N/A N/A N/A N/A 2020.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099568 ENSMUST00000191474 0.726±0.05 0.647±0.30 N/A 7.219±0.00 1.436±0.00 1.188±0.41 0.352±0.00 N/A 1.337±0.65 0.527±0.00 0.168±0.08 1.127±0.22 5.375±3.52 N/A
ENSMUSG00000099933 ENSMUST00000189240 N/A N/A N/A 0.055±0.04 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.250±0.14
ENSMUSG00000100014 ENSMUST00000185385 N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000100183 ENSMUST00000187415 1.466±0.00 1.450±0.59 0.518±0.01 1.197±0.00 1.705±0.00 N/A 1.035±0.27 1.073±0.14 0.954±0.69 N/A 0.141±0.06 4.257±1.22 0.750±0.69 1.687±0.48
ENSMUSG00000100221 ENSMUST00000187189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.678±0.91
ENSMUST00000190980 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A 0.115±0.00 3.479±0.75
ENSMUSG00000100334 ENSMUST00000190663 N/A 0.026±0.00 0.002±0.00 0.035±0.02 0.031±0.02 0.025±0.00 N/A N/A 0.002±0.00 N/A 0.010±0.00 0.028±0.02 0.011±0.01 0.022±0.00
ENSMUSG00000100502 ENSMUST00000188704 0.161±0.06 0.249±0.03 N/A N/A 1.889±0.69 N/A 0.072±0.00 0.157±0.06 0.049±0.00 0.158±0.00 0.133±0.05 0.303±0.15 0.074±0.01 0.514±0.27
ENSMUSG00000100627 ENSMUST00000185465 1.049±0.00 N/A N/A 0.138±0.00 22.319±2.16 0.275±0.00 N/A N/A N/A 0.168±0.03 0.070±0.02 1.742±1.60 0.273±0.23 0.207±0.17
ENSMUST00000190485 0.060±0.01 0.027±0.01 N/A 0.028±0.01 N/A 0.020±0.00 0.018±0.00 0.085±0.01 0.017±0.01 0.010±0.00 0.011±0.01 0.045±0.01 0.030±0.01 0.062±0.04
ENSMUSG00000101903 ENSMUST00000186055 0.119±0.00 N/A 0.146±0.00 0.438±0.00 0.157±0.04 N/A N/A N/A 0.062±0.02 N/A N/A 0.355±0.08 0.241±0.00 0.084±0.04
ENSMUST00000188927 0.074±0.00 N/A 0.448±0.03 N/A 0.382±0.21 N/A N/A 0.153±0.00 0.049±0.03 0.126±0.00 0.053±0.01 0.260±0.19 0.129±0.13 0.122±0.04

Loading