C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: t-complex protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000068039 Tcp1 10090 + 17:12915701-12925067 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000089024 Tcp1-003 12916329-12924556 protein_coding
  ENSMUST00000129632 Tcp1-002 12916449-12924562 retained_intron
  ENSMUST00000133003 Tcp1-007 12916449-12920228 retained_intron
  ENSMUST00000134665 Tcp1-008 12919673-12920640 retained_intron
  ENSMUST00000137289 Tcp1-009 12920281-12921148 retained_intron
  ENSMUST00000138709 Tcp1-010 12920117-12922732 retained_intron
  ENSMUST00000143961 Tcp1-004 12916439-12918379 protein_coding
  ENSMUST00000147724 Tcp1-005 12915701-12918114 processed_transcript
  ENSMUST00000151287 Tcp1-001 12916382-12925067 protein_coding
  ENSMUST00000151715 Tcp1-006 12916475-12919558 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089024ENSMUST00000129632ENSMUST00000133003ENSMUST00000138709ENSMUST00000143961ENSMUST00000151287ENSMUST00000151715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089024 25.606±3.95 10.599±1.08 29.056±9.79 61.532±0.00 15.984±6.62 11.659±3.67 24.627±2.52 20.370±4.39 28.722±11.17 16.535±2.69 47.305±1.80 32.399±28.77 82.532±67.89 232.652±238.74
ENSMUST00000129632 N/A N/A N/A N/A 4.459±0.00 5.676±0.00 N/A N/A N/A N/A N/A 8.422±0.00 N/A N/A
ENSMUST00000133003 41.543±0.00 27.473±7.54 N/A N/A 22.126±0.44 24.683±5.77 N/A 30.611±0.00 N/A 26.885±8.23 N/A 37.030±12.05 N/A N/A
ENSMUST00000138709 N/A N/A N/A 112.801±0.00 N/A N/A N/A N/A N/A N/A N/A 195.200±0.00 161.321±95.57 882.529±0.00
ENSMUST00000143961 N/A 28.082±6.33 N/A N/A 20.622±0.00 19.585±4.08 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151287 8.510±0.00 N/A 15.770±0.00 N/A 6.079±0.44 4.276±0.64 9.274±0.00 6.691±0.87 15.961±4.02 N/A N/A N/A N/A N/A
ENSMUST00000151715 N/A N/A N/A N/A N/A N/A N/A 40.228±0.00 N/A N/A N/A N/A N/A 367.899±83.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0002 VISTA 17:12489717-13093070

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000242 IDA pericentriolar material
GO:0000792 IEA heterochromatin
GO:0001669 IDA acrosomal vesicle
GO:0002199 IDA zona pellucida receptor complex
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005720 IDA nuclear heterochromatin
GO:0005794 IDA Golgi apparatus
GO:0005813 IEA centrosome
GO:0005815 IDA microtubule organizing center
GO:0005832 IDA chaperonin-containing T-complex
GO:0005874 IEA microtubule
GO:0006457 IEA protein folding
GO:0007339 IDA binding of sperm to zona pellucida
GO:0044053 IMP translocation of peptides or proteins into host cell cytoplasm
GO:0044297 IDA cell body
GO:0044822 IEA poly(A) RNA binding
GO:0051082 IEA unfolded protein binding
GO:0070062 IEA extracellular vesicular exosome
GO:1901998 IMP toxin transport
GO:2000109 IMP regulation of macrophage apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017891 tcp1 t-complex polypeptide 1 protein_coding Danio_rerio
ENSG00000120438 TCP1 t-complex 1 protein_coding Homo_sapiens

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